C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nitrogen permease regulator-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109389 Nprl3-012 ENSMUSG00000020289 10090 - 11:32232951-32267547 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryPlacentaENSMUST00000109389
Transcript ID Muscle Ovary Placenta
ENSMUST00000109389 3.304±0.12 15.934±0.42 9.591±2.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094P CIL_00094P_0002 VISTA 11:31945270-32546411
CIL_0008HK CIL_0008HK_0002 VISTA 11:31950452-32552344

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003281 IMP ventricular septum development
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0035909 IMP aorta morphogenesis
GO:0048738 IMP cardiac muscle tissue development
GO:0060021 IMP palate development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000399953 NPRL3-003 protein_coding Homo_sapiens 0 2010
ENST00000419636 NPRL3-011 protein_coding Homo_sapiens 0 204
ENST00000456528 NPRL3-006 nonsense_mediated_decay Homo_sapiens 0 492
ENST00000457916 NPRL3-013 nonsense_mediated_decay Homo_sapiens 0 651
ENST00000468260 NPRL3-010 protein_coding Homo_sapiens 0 204
ENST00000473674 NPRL3-008 processed_transcript Homo_sapiens 0 730
ENST00000483663 NPRL3-014 nonsense_mediated_decay Homo_sapiens 0 651
ENST00000610509 NPRL3-005 retained_intron Homo_sapiens 0 455
ENST00000611875 NPRL3-015 protein_coding Homo_sapiens 0 1565
ENST00000620134 NPRL3-201 protein_coding Homo_sapiens 0 1565
ENST00000621703 NPRL3-002 nonsense_mediated_decay Homo_sapiens 0 1568
ENST00000622194 NPRL3-004 nonsense_mediated_decay Homo_sapiens 0 1565

Loading