C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nitrogen permease regulator-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137950 Nprl3-016 ENSMUSG00000020289 10090 - 11:32232943-32267629 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000137950
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000137950 20.260±6.78 28.342±6.92 19.055±4.17 10.627±2.18 11.614±2.71 12.895±3.55 10.026±2.52 14.965±2.78 5.878±1.22 36.317±2.29 13.882±0.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094P CIL_00094P_0002 VISTA 11:31945270-32546411
CIL_0008HK CIL_0008HK_0002 VISTA 11:31950452-32552344

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003281 IMP ventricular septum development
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0035909 IMP aorta morphogenesis
GO:0048738 IMP cardiac muscle tissue development
GO:0060021 IMP palate development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000399953 NPRL3-003 protein_coding Homo_sapiens 0 1578
ENST00000457916 NPRL3-013 nonsense_mediated_decay Homo_sapiens 0 651
ENST00000473674 NPRL3-008 processed_transcript Homo_sapiens 0 730
ENST00000483663 NPRL3-014 nonsense_mediated_decay Homo_sapiens 0 651
ENST00000610509 NPRL3-005 retained_intron Homo_sapiens 0 464
ENST00000611875 NPRL3-015 protein_coding Homo_sapiens 0 1574
ENST00000620134 NPRL3-201 protein_coding Homo_sapiens 0 1574
ENST00000621703 NPRL3-002 nonsense_mediated_decay Homo_sapiens 0 1820
ENST00000622194 NPRL3-004 nonsense_mediated_decay Homo_sapiens 0 1574

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