C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nitrogen permease regulator-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020530 Nprl3-013 ENSMUSG00000020289 10090 - 11:32231963-32267707 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020530
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020530 11.381±2.47 24.981±5.63 6.641±0.07 7.094±2.58 14.821±3.14 9.300±0.58 6.009±0.64 11.294±2.49 6.660±1.53 13.143±1.09 1.841±0.25 24.901±2.02 2.577±0.10 9.161±1.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094P CIL_00094P_0002 VISTA 11:31945270-32546411
CIL_0008HK CIL_0008HK_0002 VISTA 11:31950452-32552344

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003281 IMP ventricular septum development
GO:0003674 ND molecular_function
GO:0005096 IEA GTPase activator activity
GO:0005575 ND cellular_component
GO:0035909 IMP aorta morphogenesis
GO:0043547 IEA positive regulation of GTPase activity
GO:0048738 IMP cardiac muscle tissue development
GO:0060021 IMP palate development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000399953 NPRL3-003 protein_coding Homo_sapiens 0 1574
ENST00000419636 NPRL3-011 protein_coding Homo_sapiens 0 412
ENST00000456528 NPRL3-006 nonsense_mediated_decay Homo_sapiens 0 207
ENST00000457916 NPRL3-013 nonsense_mediated_decay Homo_sapiens 0 1000
ENST00000468260 NPRL3-010 protein_coding Homo_sapiens 0 817
ENST00000473674 NPRL3-008 processed_transcript Homo_sapiens 0 1016
ENST00000483663 NPRL3-014 nonsense_mediated_decay Homo_sapiens 0 933
ENST00000610509 NPRL3-005 retained_intron Homo_sapiens 0 464
ENST00000611875 NPRL3-015 protein_coding Homo_sapiens 0 2104
ENST00000620134 NPRL3-201 protein_coding Homo_sapiens 0 2104
ENST00000621703 NPRL3-002 nonsense_mediated_decay Homo_sapiens 0 1574
ENST00000622194 NPRL3-004 nonsense_mediated_decay Homo_sapiens 0 1661

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