C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nitrogen permease regulator-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141859 Nprl3-001 ENSMUSG00000020289 10090 - 11:32231263-32267689 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleENSMUST00000141859
Transcript ID Brain Muscle
ENSMUST00000141859 3.288±0.00 0.952±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094P CIL_00094P_0002 VISTA 11:31945270-32546411
CIL_0008HK CIL_0008HK_0002 VISTA 11:31950452-32552344

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003281 IMP ventricular septum development
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0035909 IMP aorta morphogenesis
GO:0048738 IMP cardiac muscle tissue development
GO:0060021 IMP palate development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000219431 MPG-001 protein_coding Homo_sapiens 0 342
ENST00000356432 MPG-002 protein_coding Homo_sapiens 0 342
ENST00000397817 MPG-201 protein_coding Homo_sapiens 0 342
ENST00000399953 NPRL3-003 protein_coding Homo_sapiens 0 1574
ENST00000436333 MPG-004 protein_coding Homo_sapiens 0 252
ENST00000457916 NPRL3-013 nonsense_mediated_decay Homo_sapiens 0 737
ENST00000473674 NPRL3-008 processed_transcript Homo_sapiens 0 817
ENST00000483663 NPRL3-014 nonsense_mediated_decay Homo_sapiens 0 737
ENST00000610509 NPRL3-005 retained_intron Homo_sapiens 0 464
ENST00000611875 NPRL3-015 protein_coding Homo_sapiens 0 1661
ENST00000620134 NPRL3-201 protein_coding Homo_sapiens 0 1661
ENST00000621703 NPRL3-002 nonsense_mediated_decay Homo_sapiens 0 1574
ENST00000622194 NPRL3-004 nonsense_mediated_decay Homo_sapiens 0 1903

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