C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ADP-ribosylation factor 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020440 Arf5 10090 + 6:28423560-28426602 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020717 Arf5-001 28423560-28426602 protein_coding
  ENSMUST00000169841 Arf5-201 28423590-28426346 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020717ENSMUST00000169841
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020717 64.416±3.55 122.097±20.62 44.065±0.96 75.630±18.66 94.462±41.97 85.240±23.85 47.501±6.29 68.159±5.02 82.099±63.26 81.653±4.25 25.141±3.12 107.662±44.66 126.395±62.12 25.923±5.20
ENSMUST00000169841 48.055±16.14 N/A 44.104±11.53 83.847±12.94 41.953±8.58 145.612±25.19 23.195±4.57 28.014±3.03 98.987±58.90 35.159±7.85 10.646±2.46 155.927±76.99 58.173±16.41 38.086±7.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LN CIL_0008LN_0002 VISTA 6:28095025-28698247
CIL_0001OK CIL_0001OK_0002 CGP 6:28239931-28428390
CIL_0001OJ CIL_0001OJ_0002 CGP 6:28416091-28428390
CIL_0001OI CIL_0001OI_0002 CGP 6:28423560-28438622

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005525 TAS GTP binding
GO:0005737 IDA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 TAS protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000004059 ARF5 ADP-ribosylation factor 5 protein_coding Homo_sapiens

Loading