C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: rhomboid 5 homolog 2 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020806 Rhbdf2 10090 - 11:116598165-116627019 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000103028 Rhbdf2-001 116598169-116627019 protein_coding
  ENSMUST00000103029 Rhbdf2-003 116598165-116624200 protein_coding
  ENSMUST00000126819 Rhbdf2-002 116603253-116624247 retained_intron
  ENSMUST00000138125 Rhbdf2-004 116601086-116602595 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103028ENSMUST00000103029ENSMUST00000126819
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.221±0.32
ENSMUST00000103029 8.794±0.90 13.882±3.98 4.901±0.56 0.314±0.16 14.002±0.19 10.292±3.44 4.859±0.78 4.566±0.98 5.371±1.72 24.608±4.07 4.780±1.84 21.124±9.71 4.609±2.17 1.040±0.55
ENSMUST00000126819 N/A 1.951±0.07 N/A N/A N/A 3.041±0.80 0.927±0.00 N/A N/A N/A N/A N/A N/A 0.054±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0002 VISTA 11:116019003-116619995
CIL_0007EV CIL_0007EV_0002 CGP 11:116586432-116627019
CIL_0000CA CIL_0000CA_0002 CGP 11:116598165-116654313

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005886 IEA plasma membrane
GO:0006508 IEA proteolysis
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0050709 IDA negative regulation of protein secretion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000129667 RHBDF2 rhomboid 5 homolog 2 (Drosophila) protein_coding Homo_sapiens

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