C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: rhomboid 5 homolog 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126819 Rhbdf2-002 ENSMUSG00000020806 10090 - 11:116603253-116624247 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartTestisENSMUST00000126819
Transcript ID Adrenal Colon Heart Testis
ENSMUST00000126819 1.951±0.07 3.041±0.80 0.927±0.00 0.054±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0002 VISTA 11:116019003-116619995
CIL_0007EV CIL_0007EV_0002 CGP 11:116586432-116627019
CIL_0000CA CIL_0000CA_0002 CGP 11:116598165-116654313

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313080 RHBDF2-001 protein_coding Homo_sapiens 0 924
ENST00000585701 RHBDF2-016 protein_coding Homo_sapiens 6e-38 161
ENST00000585989 RHBDF2-010 protein_coding Homo_sapiens 0 316
ENST00000587640 RHBDF2-005 retained_intron Homo_sapiens 0 710
ENST00000589526 RHBDF2-013 protein_coding Homo_sapiens 0 309
ENST00000589582 RHBDF2-004 retained_intron Homo_sapiens 0 316
ENST00000590168 RHBDF2-006 retained_intron Homo_sapiens 0 446
ENST00000590288 RHBDF2-008 protein_coding Homo_sapiens 8e-18 95
ENST00000590322 RHBDF2-015 protein_coding Homo_sapiens 8e-22 108
ENST00000591192 RHBDF2-014 protein_coding Homo_sapiens 2e-37 159
ENST00000591697 RHBDF2-009 protein_coding Homo_sapiens 0 233
ENST00000591879 RHBDF2-017 protein_coding Homo_sapiens 0 233
ENST00000591885 RHBDF2-002 protein_coding Homo_sapiens 0 924
ENST00000592123 RHBDF2-012 protein_coding Homo_sapiens 2e-40 171
ENST00000592378 RHBDF2-019 processed_transcript Homo_sapiens 5.00264e-43 178

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