C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007EV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000129673-ENSG00000129667 CGP 9606 17:76453351-76501790
GeneTranscriptPositionBiotype
ENSG00000129667 (RHBDF2)
rhomboid 5 homolog 2 (Drosophila) 		ENST00000313080 (RHBDF2-001) 76470896-76501407 protein_coding
ENST00000585701 (RHBDF2-016) 76481383-76493154 protein_coding
ENST00000585989 (RHBDF2-010) 76479212-76501421 protein_coding
ENST00000587640 (RHBDF2-005) 76475923-76481527 retained_intron
ENST00000589526 (RHBDF2-013) 76479736-76493202 protein_coding
ENST00000589582 (RHBDF2-004) 76474204-76481547 retained_intron
ENST00000590168 (RHBDF2-006) 76470891-76477731 retained_intron
ENST00000590288 (RHBDF2-008) 76481446-76501371 protein_coding
ENST00000590322 (RHBDF2-015) 76481439-76488178 protein_coding
ENST00000591192 (RHBDF2-014) 76481384-76493154 protein_coding
ENST00000591255 (RHBDF2-011) 76481485-76501415 protein_coding
ENST00000591697 (RHBDF2-009) 76479783-76501423 protein_coding
ENST00000591860 (RHBDF2-020) 76471814-76473075 protein_coding
ENST00000591879 (RHBDF2-017) 76479786-76481894 protein_coding
ENST00000591885 (RHBDF2-002) 76471069-76501790 protein_coding
ENST00000592123 (RHBDF2-012) 76479082-76501412 protein_coding
ENST00000592378 (RHBDF2-019) 76479146-76501384 processed_transcript
ENST00000593103 (RHBDF2-018) 76487411-76501415 retained_intron
ENSG00000129673 (AANAT)
aralkylamine N-acetyltransferase 		ENST00000250615 (AANAT-001) 76453351-76470117 protein_coding
ENST00000392492 (AANAT-002) 76467569-76470117 protein_coding
ENST00000585649 (AANAT-004) 76468610-76469687 protein_coding
ENST00000587798 (AANAT-003) 76467718-76470001 nonsense_mediated_decay

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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CIL_0007EV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020804-ENSMUSG00000020806 CGP 10090 11:116586432-116627019
GeneTranscriptPositionBiotype
ENSMUSG00000020804 (Aanat)
arylalkylamine N-acetyltransferase 		ENSMUST00000021160 (Aanat-002) 116593687-116597545 nonsense_mediated_decay
ENSMUST00000123507 (Aanat-005) 116595576-116597545 nonsense_mediated_decay
ENSMUST00000132601 (Aanat-003) 116595771-116596265 processed_transcript
ENSMUST00000142978 (Aanat-004) 116586432-116597333 processed_transcript
ENSMUST00000153476 (Aanat-001) 116593687-116597680 protein_coding
ENSMUSG00000020806 (Rhbdf2)
rhomboid 5 homolog 2 (Drosophila) 		ENSMUST00000103028 (Rhbdf2-001) 116598169-116627019 protein_coding
ENSMUST00000103029 (Rhbdf2-003) 116598165-116624200 protein_coding
ENSMUST00000126819 (Rhbdf2-002) 116603253-116624247 retained_intron
ENSMUST00000138125 (Rhbdf2-004) 116601086-116602595 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007EV_0001ENSG00000129667ENST00000313080ENST00000585701ENST00000585989ENST00000587640ENST00000589526ENST00000589582ENST00000590168ENST00000590288ENST00000590322ENST00000591192ENST00000591255ENST00000591697ENST00000591860ENST00000591879ENST00000591885ENST00000592123ENST00000592378ENST00000593103ENSG00000129673ENST00000250615ENST00000392492ENST00000585649ENST00000587798CIL_0007EV_0002ENSMUSG00000020804ENSMUST00000021160ENSMUST00000123507ENSMUST00000132601ENSMUST00000142978ENSMUST00000153476ENSMUSG00000020806ENSMUST00000103028ENSMUST00000103029ENSMUST00000126819ENSMUST00000138125
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007EV_0001ENSG00000129667ENST00000313080ENST00000585701ENST00000585989ENST00000587640ENST00000589526ENST00000589582ENST00000590168ENST00000590288ENST00000590322ENST00000591879ENST00000591885ENST00000592378ENST00000593103ENSG00000129673ENST00000250615ENST00000392492ENST00000585649ENST00000587798CIL_0007EV_0002ENSMUSG00000020804ENSMUST00000021160ENSMUST00000123507ENSMUST00000132601ENSMUST00000142978ENSMUST00000153476ENSMUSG00000020806ENSMUST00000103028ENSMUST00000103029ENSMUST00000126819
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000129667 ENST00000313080 N/A 11.448±0.00 N/A 1.455±0.00 1.111±0.00 1.808±0.00 N/A 1.615±0.00 0.672±0.00 7.302±0.00 N/A 1.330±0.00 1.629±0.00 0.550±0.23
ENST00000585701 N/A N/A 1.009±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585989 N/A N/A N/A 0.517±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587640 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.400±0.00 N/A N/A N/A 0.513±0.00
ENST00000589526 N/A N/A N/A N/A N/A N/A N/A 2.311±0.00 N/A N/A N/A N/A N/A N/A
ENST00000589582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.268±0.00 N/A N/A N/A
ENST00000590168 N/A 11.861±0.00 0.380±0.00 1.511±0.86 1.258±0.39 2.153±0.00 N/A 1.265±1.10 0.638±0.29 2.991±1.91 0.248±0.00 4.311±3.54 2.326±0.00 1.185±0.03
ENST00000590288 N/A N/A N/A 0.640±0.00 N/A 0.793±0.00 N/A N/A N/A 2.343±0.00 N/A N/A N/A N/A
ENST00000590322 N/A N/A N/A N/A 2.294±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591255 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591879 N/A N/A N/A N/A N/A N/A N/A 1.028±0.00 N/A N/A N/A N/A N/A N/A
ENST00000591885 N/A N/A N/A 0.847±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592123 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592378 N/A N/A N/A N/A N/A N/A N/A N/A 1.248±0.00 N/A N/A N/A N/A N/A
ENST00000593103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.963±0.00
ENSG00000129673 ENST00000250615 0.022±0.00 0.373±0.00 N/A 0.033±0.00 0.051±0.00 N/A 0.018±0.00 N/A 0.044±0.00 0.082±0.00 N/A 0.026±0.00 N/A 0.499±0.07
ENST00000392492 N/A 0.268±0.00 N/A N/A N/A N/A 0.080±0.00 N/A N/A N/A 0.040±0.00 N/A 0.085±0.00 0.590±0.00
ENST00000585649 N/A 0.593±0.00 N/A 0.135±0.00 N/A 0.066±0.00 N/A N/A N/A N/A N/A N/A 0.188±0.00 N/A
ENST00000587798 N/A N/A N/A N/A 0.054±0.00 N/A N/A N/A N/A N/A 0.066±0.00 0.314±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020804 ENSMUST00000021160 N/A N/A N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A N/A 0.095±0.03 0.071±0.03 0.051±0.00
ENSMUST00000123507 0.078±0.03 0.115±0.06 N/A N/A 0.099±0.04 N/A 0.028±0.01 0.045±0.02 0.036±0.01 0.060±0.02 N/A 0.170±0.10 0.158±0.01 0.091±0.05
ENSMUST00000132601 N/A N/A N/A N/A 1.912±0.00 1.256±0.00 N/A N/A N/A 0.447±0.01 N/A 2.065±0.77 0.664±0.00 N/A
ENSMUST00000142978 N/A 0.102±0.05 N/A N/A 0.078±0.02 N/A 0.097±0.03 0.056±0.03 N/A 0.129±0.10 0.128±0.00 0.202±0.08 0.240±0.08 0.077±0.00
ENSMUST00000153476 0.053±0.00 N/A N/A 0.184±0.00 0.051±0.00 0.065±0.04 N/A N/A 0.038±0.02 0.135±0.00 0.057±0.00 0.117±0.05 0.043±0.00 0.100±0.00
ENSMUSG00000020806 ENSMUST00000103028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.221±0.32
ENSMUST00000103029 8.794±0.90 13.882±3.98 4.901±0.56 0.314±0.16 14.002±0.19 10.292±3.44 4.859±0.78 4.566±0.98 5.371±1.72 24.608±4.07 4.780±1.84 21.124±9.71 4.609±2.17 1.040±0.55
ENSMUST00000126819 N/A 1.951±0.07 N/A N/A N/A 3.041±0.80 0.927±0.00 N/A N/A N/A N/A N/A N/A 0.054±0.00
ENSMUST00000138125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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