C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: D4, zinc and double PHD fingers, family 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021221 Dpf3 10090 - 12:83213745-83487716 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000133282 Dpf3-003 83269198-83350895 protein_coding
  ENSMUST00000140327 Dpf3-004 83260493-83294428 protein_coding
  ENSMUST00000144237 Dpf3-002 83269010-83350895 protein_coding
  ENSMUST00000147469 Dpf3-001 83213745-83350895 protein_coding
  ENSMUST00000177801 Dpf3-201 83269315-83439920 protein_coding
  ENSMUST00000177959 Dpf3-202 83269198-83487708 protein_coding
  ENSMUST00000178756 Dpf3-203 83213751-83487716 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000140327ENSMUST00000144237ENSMUST00000177801ENSMUST00000177959ENSMUST00000178756
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000140327 N/A N/A N/A N/A N/A N/A N/A N/A 0.388±0.00 N/A N/A N/A N/A N/A
ENSMUST00000144237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.014±0.96 N/A N/A 1.212±0.00
ENSMUST00000177801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.830±0.00 12.594±5.50 9.881±8.23
ENSMUST00000177959 0.489±0.16 3.468±1.01 1.081±0.07 1.956±0.50 0.989±0.34 1.087±0.48 2.528±0.56 0.984±0.32 1.005±0.44 0.297±0.09 N/A 8.080±2.68 5.028±1.13 6.462±0.86
ENSMUST00000178756 0.178±0.07 0.735±0.24 0.555±0.08 1.113±0.48 0.288±0.06 0.122±0.05 0.999±0.40 0.310±0.07 0.304±0.11 0.135±0.03 1.149±0.00 1.650±0.41 0.778±0.06 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YT CIL_0008YT_0002 VISTA 12:82772395-83374413
CIL_00033C CIL_00033C_0002 CGP 12:83213745-83541988

Gene Ontology
GO IDEvidence TypeGO Description
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007399 IMP nervous system development
GO:0008270 IEA zinc ion binding
GO:0016568 IEA chromatin modification
GO:0071565 IDA nBAF complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025309 dpf3 D4, zinc and double PHD fingers, family 3 protein_coding Danio_rerio
ENSG00000205683 DPF3 D4, zinc and double PHD fingers, family 3 protein_coding Homo_sapiens

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