C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: D4, zinc and double PHD fingers, family 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000177801 Dpf3-201 ENSMUSG00000021221 10090 - 12:83269315-83439920 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENSMUST00000177801
Transcript ID Ovary Placenta Testis
ENSMUST00000177801 8.830±0.00 12.594±5.50 9.881±8.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YT CIL_0008YT_0002 VISTA 12:82772395-83374413
CIL_00033C CIL_00033C_0002 CGP 12:83213745-83541988

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007399 IMP nervous system development
GO:0008270 IEA zinc ion binding
GO:0016568 IEA chromatin modification
GO:0071565 IDA nBAF complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000366353 DPF3-005 nonsense_mediated_decay Homo_sapiens 0 1400
ENST00000381216 DPF3-002 nonsense_mediated_decay Homo_sapiens 0 1400
ENST00000541685 DPF3-201 protein_coding Homo_sapiens 0 1400
ENST00000546183 DPF3-001 protein_coding Homo_sapiens 0 1400
ENST00000553608 DPF3-014 processed_transcript Homo_sapiens 0 296
ENST00000554594 DPF3-013 processed_transcript Homo_sapiens 0 481
ENST00000556238 DPF3-010 processed_transcript Homo_sapiens 0 713
ENST00000556509 DPF3-004 protein_coding Homo_sapiens 0 976
ENST00000556891 DPF3-011 processed_transcript Homo_sapiens 0 632
ENST00000556997 DPF3-012 processed_transcript Homo_sapiens 0 257
ENST00000557704 DPF3-006 processed_transcript Homo_sapiens 0 1086
ENST00000610283 DPF3-202 protein_coding Homo_sapiens 0 1400
ENST00000614862 DPF3-203 protein_coding Homo_sapiens 0 1400

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