C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: D4, zinc and double PHD fingers, family 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140327 Dpf3-004 ENSMUSG00000021221 10090 - 12:83260493-83294428 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000140327
Transcript ID Liver
ENSMUST00000140327 0.388±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YT CIL_0008YT_0002 VISTA 12:82772395-83374413
CIL_00033C CIL_00033C_0002 CGP 12:83213745-83541988

Gene Ontology

GO IDEvidence TypeGO Description
GO:0071565 IDA nBAF complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000366353 DPF3-005 nonsense_mediated_decay Homo_sapiens 0 296
ENST00000381216 DPF3-002 nonsense_mediated_decay Homo_sapiens 0 296
ENST00000541685 DPF3-201 protein_coding Homo_sapiens 0 296
ENST00000546183 DPF3-001 protein_coding Homo_sapiens 0 296
ENST00000554594 DPF3-013 processed_transcript Homo_sapiens 0 263
ENST00000556238 DPF3-010 processed_transcript Homo_sapiens 0 296
ENST00000556509 DPF3-004 protein_coding Homo_sapiens 0 296
ENST00000556891 DPF3-011 processed_transcript Homo_sapiens 0 206
ENST00000556997 DPF3-012 processed_transcript Homo_sapiens 0 206
ENST00000557704 DPF3-006 processed_transcript Homo_sapiens 0 296
ENST00000610283 DPF3-202 protein_coding Homo_sapiens 0 296
ENST00000614862 DPF3-203 protein_coding Homo_sapiens 0 296

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