C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: papilin, proteoglycan-like sulfated glycoprotein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021223 Papln 10090 + 12:83763634-83792382 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021646 Papln-002 83763654-83792355 protein_coding
  ENSMUST00000121733 Papln-001 83763634-83792382 protein_coding
  ENSMUST00000152904 Papln-003 83763662-83781132 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021646ENSMUST00000121733ENSMUST00000152904
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021646 3.873±0.02 2.058±0.48 0.341±0.06 0.171±0.07 13.713±4.32 1.706±0.76 3.593±0.88 0.902±0.19 0.968±0.49 0.614±0.09 0.366±0.00 5.171±2.67 1.108±0.92 2.611±0.44
ENSMUST00000121733 N/A 0.426±0.00 0.586±0.04 0.073±0.02 10.531±2.99 0.451±0.10 1.194±0.00 0.243±0.00 0.448±0.29 N/A 0.444±0.28 1.176±0.38 1.220±0.87 0.804±0.00
ENSMUST00000152904 N/A N/A N/A N/A N/A N/A N/A 0.169±0.00 N/A N/A 0.068±0.00 0.281±0.00 0.212±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008P0 CIL_0008P0_0002 VISTA 12:83418739-84022790
CIL_0001TQ CIL_0001TQ_0002 CGP 12:83688203-83792382
CIL_0001TR CIL_0001TR_0002 CGP 12:83763634-83921934

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004222 IEA metalloendopeptidase activity
GO:0004867 IEA serine-type endopeptidase inhibitor activity
GO:0005604 IDA basement membrane
GO:0006508 IEA proteolysis
GO:0008270 IEA zinc ion binding
GO:0010951 IEA negative regulation of endopeptidase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027867 paplna papilin a, proteoglycan-like sulfated glycoprotein protein_coding Danio_rerio
ENSG00000100767 PAPLN papilin, proteoglycan-like sulfated glycoprotein protein_coding Homo_sapiens

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