C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001TQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000080815-ENSG00000100767 CGP 9606 14:73136418-73274640
GeneTranscriptPositionBiotype
ENSG00000080815 (PSEN1)
presenilin 1 		ENST00000324501 (PSEN1-001) 73136447-73223691 protein_coding
ENST00000357710 (PSEN1-002) 73136447-73220401 protein_coding
ENST00000394157 (PSEN1-004) 73136447-73174204 protein_coding
ENST00000394164 (PSEN1-003) 73136817-73220401 protein_coding
ENST00000406768 (PSEN1-005) 73167829-73220401 protein_coding
ENST00000553447 (PSEN1-019) 73136477-73170884 processed_transcript
ENST00000553599 (PSEN1-012) 73136445-73170996 protein_coding
ENST00000553719 (PSEN1-016) 73136444-73173680 protein_coding
ENST00000553855 (PSEN1-024) 73148020-73217158 nonsense_mediated_decay
ENST00000554131 (PSEN1-020) 73136496-73171036 protein_coding
ENST00000554995 (PSEN1-023) 73197710-73211853 retained_intron
ENST00000555254 (PSEN1-021) 73136456-73173694 protein_coding
ENST00000555386 (PSEN1-006) 73148020-73219289 nonsense_mediated_decay
ENST00000555867 (PSEN1-022) 73206153-73219396 retained_intron
ENST00000556011 (PSEN1-026) 73136447-73160049 protein_coding
ENST00000556066 (PSEN1-011) 73147492-73170895 protein_coding
ENST00000556533 (PSEN1-009) 73136435-73170998 protein_coding
ENST00000556864 (PSEN1-007) 73136435-73170912 protein_coding
ENST00000556951 (PSEN1-014) 73136436-73170994 protein_coding
ENST00000557037 (PSEN1-008) 73136541-73170909 protein_coding
ENST00000557293 (PSEN1-015) 73136437-73171007 protein_coding
ENST00000557356 (PSEN1-013) 73136418-73173644 protein_coding
ENST00000557511 (PSEN1-027) 73148020-73219289 protein_coding
ENST00000559361 (PSEN1-029) 73136518-73173707 nonsense_mediated_decay
ENST00000560005 (PSEN1-028) 73136451-73171050 protein_coding
ENSG00000100767 (PAPLN)
papilin, proteoglycan-like sulfated glycoprotein 		ENST00000216658 (PAPLN-004) 73237580-73273365 nonsense_mediated_decay
ENST00000340738 (PAPLN-001) 73237497-73274640 protein_coding
ENST00000554301 (PAPLN-002) 73239616-73272754 protein_coding
ENST00000554314 (PAPLN-012) 73261166-73264576 processed_transcript
ENST00000554527 (PAPLN-013) 73268379-73272933 retained_intron
ENST00000555035 (PAPLN-011) 73249776-73251018 retained_intron
ENST00000555123 (PAPLN-007) 73237579-73273365 nonsense_mediated_decay
ENST00000555445 (PAPLN-003) 73239625-73273003 protein_coding
ENST00000555700 (PAPLN-008) 73262050-73274623 retained_intron
ENST00000557061 (PAPLN-009) 73261156-73274620 nonsense_mediated_decay
ENST00000559759 (PAPLN-014) 73262500-73274620 protein_coding
ENSG00000258376 (RP4-647C14.2)
 ENST00000554614 (RP4-647C14.2-001) 73242651-73245979 antisense
ENSG00000258944 (RP4-647C14.3)
 ENST00000556578 (RP4-647C14.3-001) 73272182-73274081 antisense
ENSG00000259109 (RP4-687K1.2)
 ENST00000554078 (RP4-687K1.2-001) 73189763-73190004 processed_pseudogene
ENSG00000274991 (AC004846.1)
 ENST00000616607 (AC004846.1-201) 73208378-73208463 miRNA
CIL_0001TQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000019969-ENSMUSG00000021223 CGP 10090 12:83688203-83792382
GeneTranscriptPositionBiotype
ENSMUSG00000019969 (Psen1)
presenilin 1 		ENSMUST00000041806 (Psen1-201) 83688203-83734113 protein_coding
ENSMUST00000101225 (Psen1-202) 83688563-83735199 protein_coding
ENSMUSG00000021223 (Papln)
papilin, proteoglycan-like sulfated glycoprotein 		ENSMUST00000021646 (Papln-002) 83763654-83792355 protein_coding
ENSMUST00000121733 (Papln-001) 83763634-83792382 protein_coding
ENSMUST00000152904 (Papln-003) 83763662-83781132 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001TQ_0001ENSG00000080815ENST00000324501ENST00000357710ENST00000394164ENST00000557511ENSG00000100767ENST00000216658ENST00000340738ENST00000554301ENST00000555445ENST00000555700ENST00000557061ENST00000559759ENSG00000258376ENST00000554614ENSG00000258944ENST00000556578ENSG00000259109ENST00000554078ENSG00000274991ENST00000616607CIL_0001TQ_0002ENSMUSG00000019969ENSMUST00000041806ENSMUST00000101225ENSMUSG00000021223ENSMUST00000021646ENSMUST00000121733ENSMUST00000152904
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000080815 ENST00000324501 4.677±0.00 3.123±0.00 N/A 4.981±1.02 2.551±1.12 3.097±0.00 1.272±0.52 3.925±0.00 0.995±0.63 3.005±0.25 1.247±0.00 2.578±1.70 3.265±0.84 3.032±0.01
ENST00000357710 13.539±0.00 7.133±0.00 5.049±0.00 15.613±1.84 11.980±1.00 10.431±0.19 3.237±1.54 11.163±4.82 5.922±0.83 7.403±0.64 5.211±1.58 11.314±2.14 20.410±2.86 23.246±3.23
ENST00000394157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394164 N/A 2.863±0.00 N/A N/A N/A N/A N/A N/A N/A 2.383±0.00 N/A N/A N/A N/A
ENST00000406768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555386 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555867 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556864 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557511 N/A N/A N/A N/A N/A N/A N/A 4.020±0.00 N/A N/A N/A N/A N/A N/A
ENST00000559361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560005 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000100767 ENST00000216658 N/A N/A 1.409±0.00 N/A N/A N/A N/A N/A N/A 0.544±0.00 0.281±0.00 N/A N/A N/A
ENST00000340738 N/A 7.697±0.00 N/A 0.992±0.00 N/A 1.316±0.00 0.439±0.00 N/A N/A 1.808±0.00 N/A 1.560±0.79 N/A 3.535±0.00
ENST00000554301 0.952±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555123 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555445 N/A N/A N/A 0.405±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.735±0.00
ENST00000557061 N/A N/A N/A N/A 0.893±0.19 N/A N/A N/A N/A 0.765±0.00 N/A N/A N/A N/A
ENST00000559759 0.758±0.00 13.083±0.00 N/A 1.806±0.00 1.375±0.00 2.394±0.00 0.379±0.04 9.515±0.00 N/A 2.220±0.00 0.507±0.00 5.197±1.07 2.060±1.43 4.309±2.10
ENSG00000258376 ENST00000554614 0.675±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.170±0.00 0.563±0.00 0.352±0.00 N/A
ENSG00000258944 ENST00000556578 N/A N/A N/A N/A N/A N/A N/A N/A 0.409±0.00 2.803±0.00 N/A N/A N/A N/A
ENSG00000259109 ENST00000554078 N/A 0.171±0.00 N/A 0.386±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000274991 ENST00000616607 N/A 1.944±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.905±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019969 ENSMUST00000041806 3.246±1.15 5.380±1.65 4.223±0.00 4.209±0.91 5.022±1.16 12.472±2.44 2.224±0.23 3.337±0.22 2.169±0.68 4.582±0.51 2.211±0.36 6.973±3.13 12.364±5.66 21.665±4.47
ENSMUST00000101225 9.153±1.68 7.541±1.21 8.212±2.18 9.614±1.99 4.469±1.82 19.605±2.78 2.996±1.33 8.817±1.09 3.314±1.52 8.442±1.42 2.597±1.56 5.519±5.29 19.437±13.91 32.668±1.68
ENSMUSG00000021223 ENSMUST00000021646 3.873±0.02 2.058±0.48 0.341±0.06 0.171±0.07 13.713±4.32 1.706±0.76 3.593±0.88 0.902±0.19 0.968±0.49 0.614±0.09 0.366±0.00 5.171±2.67 1.108±0.92 2.611±0.44
ENSMUST00000121733 N/A 0.426±0.00 0.586±0.04 0.073±0.02 10.531±2.99 0.451±0.10 1.194±0.00 0.243±0.00 0.448±0.29 N/A 0.444±0.28 1.176±0.38 1.220±0.87 0.804±0.00
ENSMUST00000152904 N/A N/A N/A N/A N/A N/A N/A 0.169±0.00 N/A N/A 0.068±0.00 0.281±0.00 0.212±0.00 N/A

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