C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001TR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100767-ENSG00000133961 CGP 9606 14:73237497-73463642
GeneTranscriptPositionBiotype
ENSG00000100767 (PAPLN)
papilin, proteoglycan-like sulfated glycoprotein 		ENST00000216658 (PAPLN-004) 73237580-73273365 nonsense_mediated_decay
ENST00000340738 (PAPLN-001) 73237497-73274640 protein_coding
ENST00000554301 (PAPLN-002) 73239616-73272754 protein_coding
ENST00000554314 (PAPLN-012) 73261166-73264576 processed_transcript
ENST00000554527 (PAPLN-013) 73268379-73272933 retained_intron
ENST00000555035 (PAPLN-011) 73249776-73251018 retained_intron
ENST00000555123 (PAPLN-007) 73237579-73273365 nonsense_mediated_decay
ENST00000555445 (PAPLN-003) 73239625-73273003 protein_coding
ENST00000555700 (PAPLN-008) 73262050-73274623 retained_intron
ENST00000557061 (PAPLN-009) 73261156-73274620 nonsense_mediated_decay
ENST00000559759 (PAPLN-014) 73262500-73274620 protein_coding
ENSG00000258376 (RP4-647C14.2)
 ENST00000554614 (RP4-647C14.2-001) 73242651-73245979 antisense
ENSG00000258944 (RP4-647C14.3)
 ENST00000556578 (RP4-647C14.3-001) 73272182-73274081 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0001TR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021223-ENSMUSG00000021224 CGP 10090 12:83763634-83921934
GeneTranscriptPositionBiotype
ENSMUSG00000021223 (Papln)
papilin, proteoglycan-like sulfated glycoprotein 		ENSMUST00000021646 (Papln-002) 83763654-83792355 protein_coding
ENSMUST00000121733 (Papln-001) 83763634-83792382 protein_coding
ENSMUST00000152904 (Papln-003) 83763662-83781132 retained_intron
ENSMUSG00000021224 (Numb)
numb gene homolog (Drosophila) 		ENSMUST00000021647 (Numb-004) 83795439-83842343 protein_coding
ENSMUST00000085215 (Numb-005) 83794071-83921844 nonsense_mediated_decay
ENSMUST00000110298 (Numb-007) 83794036-83876810 nonsense_mediated_decay
ENSMUST00000117217 (Numb-001) 83794034-83921934 protein_coding
ENSMUST00000125089 (Numb-011) 83831828-83876798 retained_intron
ENSMUST00000126943 (Numb-010) 83811291-83921890 protein_coding
ENSMUST00000129335 (Numb-002) 83795439-83842343 protein_coding
ENSMUST00000135962 (Numb-008) 83808106-83921856 protein_coding
ENSMUST00000136848 (Numb-009) 83808177-83921883 protein_coding
ENSMUST00000154043 (Numb-003) 83795439-83842343 protein_coding
ENSMUST00000155112 (Numb-006) 83803946-83921867 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001TR_0001ENSG00000100767ENST00000216658ENST00000340738ENST00000554301ENST00000554314ENST00000554527ENST00000555035ENST00000555123ENST00000555445ENST00000555700ENST00000557061ENST00000559759ENSG00000258376ENST00000554614ENSG00000258944ENST00000556578CIL_0001TR_0002ENSMUSG00000021223ENSMUST00000021646ENSMUST00000121733ENSMUST00000152904ENSMUSG00000021224ENSMUST00000021647ENSMUST00000085215ENSMUST00000110298ENSMUST00000117217ENSMUST00000125089ENSMUST00000126943ENSMUST00000129335ENSMUST00000135962ENSMUST00000136848ENSMUST00000154043ENSMUST00000155112
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001TR_0001ENSG00000100767ENST00000216658ENST00000340738ENST00000554301ENST00000555445ENST00000555700ENST00000557061ENST00000559759ENSG00000258376ENST00000554614ENSG00000258944ENST00000556578CIL_0001TR_0002ENSMUSG00000021223ENSMUST00000021646ENSMUST00000121733ENSMUST00000152904ENSMUSG00000021224ENSMUST00000021647ENSMUST00000085215ENSMUST00000110298ENSMUST00000117217ENSMUST00000129335ENSMUST00000154043
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100767 ENST00000216658 N/A N/A 1.409±0.00 N/A N/A N/A N/A N/A N/A 0.544±0.00 0.281±0.00 N/A N/A N/A
ENST00000340738 N/A 7.697±0.00 N/A 0.992±0.00 N/A 1.316±0.00 0.439±0.00 N/A N/A 1.808±0.00 N/A 1.560±0.79 N/A 3.535±0.00
ENST00000554301 0.952±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555123 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555445 N/A N/A N/A 0.405±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.735±0.00
ENST00000557061 N/A N/A N/A N/A 0.893±0.19 N/A N/A N/A N/A 0.765±0.00 N/A N/A N/A N/A
ENST00000559759 0.758±0.00 13.083±0.00 N/A 1.806±0.00 1.375±0.00 2.394±0.00 0.379±0.04 9.515±0.00 N/A 2.220±0.00 0.507±0.00 5.197±1.07 2.060±1.43 4.309±2.10
ENSG00000258376 ENST00000554614 0.675±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.170±0.00 0.563±0.00 0.352±0.00 N/A
ENSG00000258944 ENST00000556578 N/A N/A N/A N/A N/A N/A N/A N/A 0.409±0.00 2.803±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021223 ENSMUST00000021646 3.873±0.02 2.058±0.48 0.341±0.06 0.171±0.07 13.713±4.32 1.706±0.76 3.593±0.88 0.902±0.19 0.968±0.49 0.614±0.09 0.366±0.00 5.171±2.67 1.108±0.92 2.611±0.44
ENSMUST00000121733 N/A 0.426±0.00 0.586±0.04 0.073±0.02 10.531±2.99 0.451±0.10 1.194±0.00 0.243±0.00 0.448±0.29 N/A 0.444±0.28 1.176±0.38 1.220±0.87 0.804±0.00
ENSMUST00000152904 N/A N/A N/A N/A N/A N/A N/A 0.169±0.00 N/A N/A 0.068±0.00 0.281±0.00 0.212±0.00 N/A
ENSMUSG00000021224 ENSMUST00000021647 11.013±1.93 25.949±2.03 7.088±1.37 4.170±0.04 19.610±3.64 15.785±5.82 6.566±0.48 5.815±1.65 8.687±2.90 51.833±12.79 1.591±0.36 25.808±9.03 24.363±1.77 N/A
ENSMUST00000085215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.961±0.00 7.856±2.32 N/A
ENSMUST00000110298 N/A N/A N/A 3.975±0.00 2.624±0.31 4.615±0.26 N/A 3.913±1.13 2.634±0.91 6.884±0.22 N/A 5.929±0.00 7.653±1.29 1.954±0.00
ENSMUST00000117217 5.968±1.29 5.217±1.03 11.297±2.98 4.364±1.99 8.934±0.23 6.457±0.52 3.749±0.89 5.420±1.48 5.358±1.26 15.174±3.98 2.568±0.39 6.853±2.44 12.709±5.18 2.291±0.27
ENSMUST00000125089 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126943 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129335 N/A N/A N/A N/A N/A 18.847±6.53 N/A N/A N/A N/A N/A 7.220±0.72 N/A N/A
ENSMUST00000135962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154043 3.132±0.00 N/A N/A 2.415±0.00 N/A 25.523±9.79 N/A 13.072±4.30 5.606±1.10 N/A N/A 7.981±2.03 8.316±2.59 7.376±0.94
ENSMUST00000155112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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