C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAN GTPase activating protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052374 Rangap1-201 ENSMUSG00000022391 10090 - 15:81704248-81729919 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000052374
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000052374 13.772±3.05 15.512±2.30 12.178±0.65 37.759±2.64 11.676±3.39 18.693±1.90 5.698±0.72 10.657±2.17 28.042±18.20 11.189±0.84 8.378±1.07 18.912±3.16 37.535±18.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000V9 CIL_0000V9_0003 CGP 15:81678296-81729919
CIL_00065N CIL_00065N_0002 CGP 15:81704248-81796269

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000776 ISS kinetochore
GO:0005098 IEA Ran GTPase activator activity
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0007165 IEA signal transduction
GO:0016020 IEA membrane
GO:0032853 IEA positive regulation of Ran GTPase activity
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356244 RANGAP1-001 protein_coding Homo_sapiens 0 1930
ENST00000405486 RANGAP1-003 protein_coding Homo_sapiens 0 1916
ENST00000418067 RANGAP1-008 protein_coding Homo_sapiens 0 364
ENST00000446258 RANGAP1-007 protein_coding Homo_sapiens 0 383
ENST00000452543 RANGAP1-009 protein_coding Homo_sapiens 0 472
ENST00000455915 RANGAP1-004 protein_coding Homo_sapiens 0 1916
ENST00000611416 CYP20A1-201 protein_coding Homo_sapiens 0.000000007 69

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