C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphomannomutase 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022711 Pmm2 10090 + 16:8637674-8657531 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023396 Pmm2-001 8637674-8657531 protein_coding
  ENSMUST00000130885 Pmm2-003 8637723-8649115 retained_intron
  ENSMUST00000131385 Pmm2-005 8648592-8656742 retained_intron
  ENSMUST00000134975 Pmm2-006 8638042-8651427 processed_transcript
  ENSMUST00000142935 Pmm2-004 8645971-8648710 retained_intron
  ENSMUST00000143174 Pmm2-002 8637738-8645016 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023396ENSMUST00000130885ENSMUST00000131385ENSMUST00000134975ENSMUST00000143174
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023396 18.673±9.22 33.490±14.08 17.587±1.61 12.417±2.34 31.973±5.77 131.448±32.86 8.549±2.65 25.302±6.55 17.372±6.02 19.880±5.42 6.759±0.52 19.485±9.69 24.675±9.66 25.665±5.88
ENSMUST00000130885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.167±3.94 N/A
ENSMUST00000131385 N/A N/A N/A 21.528±0.00 N/A N/A N/A N/A N/A N/A N/A 51.688±0.00 79.301±16.50 30.133±0.00
ENSMUST00000134975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.351±0.00 21.046±0.00
ENSMUST00000143174 5.046±0.11 N/A 2.550±0.30 3.587±0.45 6.026±0.00 N/A N/A N/A N/A 3.954±0.33 N/A 7.712±1.50 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EU CIL_0000EU_0002 CGP 16:8513429-8637712
CIL_0000ET CIL_0000ET_0002 CGP 16:8633884-8657531
CIL_0000EW CIL_0000EW_0002 CGP 16:8637674-8672153

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004615 IEA phosphomannomutase activity
GO:0005737 IDA cytoplasm
GO:0009298 IEA GDP-mannose biosynthetic process
GO:0019307 IEA mannose biosynthetic process
GO:0043025 IDA neuronal cell body
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037654 pmm2 phosphomannomutase 2 protein_coding Danio_rerio
ENSG00000140650 PMM2 phosphomannomutase 2 protein_coding Homo_sapiens

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