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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0000EU_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000183044-ENSG00000184857 | CGP | 9606 | 16:8674565-8797648  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000140650  (PMM2)phosphomannomutase 2 |
ENST00000268261 (PMM2-001)
|
8797817-8849331 | protein_coding | |
|
ENST00000562025 (PMM2-017)
|
8842207-8848119 | processed_transcript | ||
|
ENST00000562318 (PMM2-003)
|
8797842-8848051 | nonsense_mediated_decay | ||
|
ENST00000562448 (PMM2-013)
|
8797842-8806679 | retained_intron | ||
|
ENST00000564030 (PMM2-008)
|
8797821-8807034 | retained_intron | ||
|
ENST00000564069 (PMM2-014)
|
8797912-8813067 | nonsense_mediated_decay | ||
|
ENST00000565221 (PMM2-006)
|
8797867-8848030 | nonsense_mediated_decay | ||
|
ENST00000565837 (PMM2-019)
|
8788840-8795662 | processed_transcript | ||
|
ENST00000565896 (PMM2-012)
|
8797842-8811667 | nonsense_mediated_decay | ||
|
ENST00000566196 (PMM2-010)
|
8797839-8802389 | retained_intron | ||
|
ENST00000566540 (PMM2-004)
|
8797842-8848777 | nonsense_mediated_decay | ||
|
ENST00000566604 (PMM2-002)
|
8797837-8848124 | nonsense_mediated_decay | ||
|
ENST00000566983 (PMM2-018)
|
8788823-8847868 | protein_coding | ||
|
ENST00000567697 (PMM2-007)
|
8807564-8849325 | retained_intron | ||
|
ENST00000568602 (PMM2-011)
|
8797842-8811111 | nonsense_mediated_decay | ||
|
ENST00000569958 (PMM2-015)
|
8797867-8848039 | protein_coding | ||
|
ENST00000570076 (PMM2-005)
|
8797850-8848322 | nonsense_mediated_decay | ||
|
ENST00000570134 (PMM2-016)
|
8797838-8829258 | nonsense_mediated_decay | ||
|
ENSG00000183044 (ABAT) 4-aminobutyrate aminotransferase |
ENST00000268251 (ABAT-001)
|
8674565-8784575 | protein_coding | |
|
ENST00000396600 (ABAT-201)
|
8712969-8784575 | protein_coding | ||
|
ENST00000425191 (ABAT-005)
|
8720716-8781590 | protein_coding | ||
|
ENST00000561870 (ABAT-013)
|
8712955-8748135 | protein_coding | ||
|
ENST00000562115 (ABAT-011)
|
8720822-8757804 | nonsense_mediated_decay | ||
|
ENST00000563215 (ABAT-004)
|
8713362-8715633 | processed_transcript | ||
|
ENST00000563992 (ABAT-007)
|
8674617-8737473 | retained_intron | ||
|
ENST00000564453 (ABAT-015)
|
8765785-8768846 | retained_intron | ||
|
ENST00000564714 (ABAT-008)
|
8674596-8750456 | protein_coding | ||
|
ENST00000565016 (ABAT-012)
|
8713601-8750485 | protein_coding | ||
|
ENST00000565671 (ABAT-014)
|
8746002-8760429 | processed_transcript | ||
|
ENST00000566590 (ABAT-002)
|
8712990-8781531 | nonsense_mediated_decay | ||
|
ENST00000567812 (ABAT-003)
|
8713614-8781579 | protein_coding | ||
|
ENST00000568847 (ABAT-009)
|
8712837-8746025 | protein_coding | ||
|
ENST00000569156 (ABAT-006)
|
8720719-8781522 | protein_coding | ||
|
ENST00000569695 (ABAT-010)
|
8712968-8713865 | processed_transcript | ||
|
ENSG00000184857 (TMEM186) transmembrane protein 186 |
ENST00000333050 (TMEM186-001)
|
8795180-8797648 | protein_coding | |
|
ENST00000564869 (TMEM186-002)
|
8780384-8797642 | processed_transcript | ||
|
ENSG00000243954 (RN7SL743P) RNA, 7SL, cytoplasmic 743, pseudogene |
ENST00000475032 (RN7SL743P-201)
|
8683254-8683551 | misc_RNA | |
|
ENSG00000260764 (RP11-475D10.5) |
ENST00000564410 (RP11-475D10.5-001)
|
8731416-8731559 | processed_pseudogene | |
|
Genome Exciting message Genes Connecting Transcripts Connecting Powered by Dalliance 0.11.11 |
| CIL_0000EU_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000057880-ENSMUSG00000043140 | CGP | 10090 | 16:8513429-8637712 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000022711 (Pmm2) phosphomannomutase 2 |
ENSMUST00000023396 (Pmm2-001)
|
8637674-8657531 | protein_coding | |
|
ENSMUST00000130885 (Pmm2-003)
|
8637723-8649115 | retained_intron | ||
|
ENSMUST00000131385 (Pmm2-005)
|
8648592-8656742 | retained_intron | ||
|
ENSMUST00000134975 (Pmm2-006)
|
8638042-8651427 | processed_transcript | ||
|
ENSMUST00000142935 (Pmm2-004)
|
8645971-8648710 | retained_intron | ||
|
ENSMUST00000143174 (Pmm2-002)
|
8637738-8645016 | retained_intron | ||
|
ENSMUSG00000043140 (Tmem186) transmembrane protein 186 |
ENSMUST00000052505 (Tmem186-001)
|
8633884-8637712 | protein_coding | |
|
ENSMUSG00000057880 (Abat) 4-aminobutyrate aminotransferase |
ENSMUST00000065987 (Abat-001)
|
8513429-8621568 | protein_coding | |
|
ENSMUST00000115838 (Abat-003)
|
8513481-8603047 | protein_coding | ||
|
ENSMUST00000115839 (Abat-005)
|
8513485-8619570 | protein_coding | ||
|
ENSMUST00000128459 (Abat-006)
|
8612878-8618577 | processed_transcript | ||
|
ENSMUST00000138987 (Abat-007)
|
8572902-8605633 | protein_coding | ||
|
ENSMUST00000140795 (Abat-002)
|
8513483-8580688 | retained_intron | ||
|
ENSMUST00000144444 (Abat-004)
|
8583627-8603047 | protein_coding | ||
|
ENSMUSG00000076039 (Gm22137) predicted gene, 22137 |
ENSMUST00000102085 (Gm22137-201)
|
8623163-8623270 | miRNA | |
|
ENSMUSG00000083505 (Gm7541) predicted gene 7541 |
ENSMUST00000118361 (Gm7541-001)
|
8623186-8623720 | processed_pseudogene | |
|
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Expression Patterns
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