C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: phosphomannomutase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130885 Pmm2-003 ENSMUSG00000022711 10090 + 16:8637723-8649115 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000130885
Transcript ID Placenta
ENSMUST00000130885 24.167±3.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EU CIL_0000EU_0002 CGP 16:8513429-8637712
CIL_0000ET CIL_0000ET_0002 CGP 16:8633884-8657531
CIL_0000EW CIL_0000EW_0002 CGP 16:8637674-8672153

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268261 PMM2-001 protein_coding Homo_sapiens 0 636
ENST00000562318 PMM2-003 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000564069 PMM2-014 nonsense_mediated_decay Homo_sapiens 0 606
ENST00000565221 PMM2-006 nonsense_mediated_decay Homo_sapiens 0 241
ENST00000565896 PMM2-012 nonsense_mediated_decay Homo_sapiens 2.8026e-45 185
ENST00000566983 PMM2-018 protein_coding Homo_sapiens 0 579
ENST00000567697 PMM2-007 retained_intron Homo_sapiens 0 243

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