C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ceramide synthase 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023021 Cers5 10090 - 15:99734881-99772885 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023762 Cers5-001 99735592-99772601 protein_coding
  ENSMUST00000109035 Cers5-002 99734881-99772462 protein_coding
  ENSMUST00000175876 Cers5-003 99739408-99772885 protein_coding
  ENSMUST00000176248 Cers5-007 99735311-99772465 nonsense_mediated_decay
  ENSMUST00000176627 Cers5-004 99745942-99772092 protein_coding
  ENSMUST00000176970 Cers5-006 99737335-99747070 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023762ENSMUST00000109035ENSMUST00000175876ENSMUST00000176248ENSMUST00000176627
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023762 15.043±4.73 23.632±4.57 15.043±1.59 10.939±5.76 21.477±6.26 13.429±2.03 6.745±1.13 13.956±1.20 2.470±1.95 16.877±4.05 2.646±0.51 27.663±7.34 26.209±10.16 8.741±3.53
ENSMUST00000109035 N/A N/A N/A N/A N/A N/A 1.710±0.59 N/A 0.107±0.00 N/A 0.281±0.05 N/A N/A 1.413±0.21
ENSMUST00000175876 N/A N/A N/A N/A N/A N/A N/A N/A 0.551±0.00 N/A N/A N/A N/A N/A
ENSMUST00000176248 N/A N/A N/A 1.632±0.00 N/A N/A N/A N/A 0.095±0.03 N/A N/A N/A N/A N/A
ENSMUST00000176627 N/A N/A N/A N/A N/A N/A N/A N/A 0.451±0.09 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PE CIL_0008PE_0002 VISTA 15:99507076-100109694
CIL_0008CC CIL_0008CC_0002 VISTA 15:99507743-100109214
CIL_00033M CIL_00033M_0003 CGP 15:99725618-99772885
CIL_0000LJ CIL_0000LJ_0002 CGP 15:99734881-99875428

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005783 IDA endoplasmic reticulum
GO:0016021 IEA integral component of membrane
GO:0030148 IDA sphingolipid biosynthetic process
GO:0046513 IDA ceramide biosynthetic process
GO:0050291 IDA sphingosine N-acyltransferase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002365 cers5 ceramide synthase 5 protein_coding Danio_rerio
ENSG00000139624 CERS5 ceramide synthase 5 protein_coding Homo_sapiens

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