C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ceramide synthase 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000175876 Cers5-003 ENSMUSG00000023021 10090 - 15:99739408-99772885 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000175876
Transcript ID Liver
ENSMUST00000175876 0.551±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PE CIL_0008PE_0002 VISTA 15:99507076-100109694
CIL_0008CC CIL_0008CC_0002 VISTA 15:99507743-100109214
CIL_00033M CIL_00033M_0003 CGP 15:99725618-99772885
CIL_0000LJ CIL_0000LJ_0002 CGP 15:99734881-99875428

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005783 IDA endoplasmic reticulum
GO:0016021 IEA integral component of membrane
GO:0030148 IDA sphingolipid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000317551 CERS5-001 protein_coding Homo_sapiens 0 590
ENST00000380189 CERS5-003 nonsense_mediated_decay Homo_sapiens 0 257
ENST00000422340 CERS5-201 protein_coding Homo_sapiens 0 592
ENST00000438450 CERS5-002 nonsense_mediated_decay Homo_sapiens 0 516
ENST00000542320 CERS5-026 nonsense_mediated_decay Homo_sapiens 0 257
ENST00000547787 CERS5-004 nonsense_mediated_decay Homo_sapiens 0 592
ENST00000547800 CERS5-020 protein_coding Homo_sapiens 0 381
ENST00000548930 CERS5-009 processed_transcript Homo_sapiens 0 298
ENST00000549089 CERS5-015 retained_intron Homo_sapiens 2.8026e-45 185
ENST00000549389 CERS5-010 nonsense_mediated_decay Homo_sapiens 0 261
ENST00000550258 CERS5-008 nonsense_mediated_decay Homo_sapiens 0 250
ENST00000551005 CERS5-005 retained_intron Homo_sapiens 0 518
ENST00000551384 CERS5-014 retained_intron Homo_sapiens 0 265
ENST00000551697 CERS5-027 nonsense_mediated_decay Homo_sapiens 0 590

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