C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ceramide synthase 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023762 Cers5-001 ENSMUSG00000023021 10090 - 15:99735592-99772601 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023762
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023762 15.043±4.73 23.632±4.57 15.043±1.59 10.939±5.76 21.477±6.26 13.429±2.03 6.745±1.13 13.956±1.20 2.470±1.95 16.877±4.05 2.646±0.51 27.663±7.34 26.209±10.16 8.741±3.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PE CIL_0008PE_0002 VISTA 15:99507076-100109694
CIL_0008CC CIL_0008CC_0002 VISTA 15:99507743-100109214
CIL_00033M CIL_00033M_0003 CGP 15:99725618-99772885
CIL_0000LJ CIL_0000LJ_0002 CGP 15:99734881-99875428

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005783 IDA endoplasmic reticulum
GO:0016021 IEA integral component of membrane
GO:0030148 IDA sphingolipid biosynthetic process
GO:0046513 IDA ceramide biosynthetic process
GO:0050291 IDA sphingosine N-acyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000317551 CERS5-001 protein_coding Homo_sapiens 0 1131
ENST00000380189 CERS5-003 nonsense_mediated_decay Homo_sapiens 0 455
ENST00000422340 CERS5-201 protein_coding Homo_sapiens 0 863
ENST00000438450 CERS5-002 nonsense_mediated_decay Homo_sapiens 0 597
ENST00000542320 CERS5-026 nonsense_mediated_decay Homo_sapiens 0 448
ENST00000547787 CERS5-004 nonsense_mediated_decay Homo_sapiens 0 863
ENST00000547800 CERS5-020 protein_coding Homo_sapiens 0 592
ENST00000548930 CERS5-009 processed_transcript Homo_sapiens 0 298
ENST00000549089 CERS5-015 retained_intron Homo_sapiens 2.8026e-45 185
ENST00000549389 CERS5-010 nonsense_mediated_decay Homo_sapiens 0 257
ENST00000550258 CERS5-008 nonsense_mediated_decay Homo_sapiens 0 246
ENST00000551005 CERS5-005 retained_intron Homo_sapiens 0 664
ENST00000551384 CERS5-014 retained_intron Homo_sapiens 0 261
ENST00000551697 CERS5-027 nonsense_mediated_decay Homo_sapiens 0 784

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