C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00033M_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000092124-ENSDARG00000002365 CGP 7955 22:5676344-5746234
GeneTranscriptPositionBiotype
ENSDARG00000002365 (cers5)
ceramide synthase 5 		ENSDART00000011076 (cers5-001) 5682177-5746234 protein_coding
ENSDARG00000092124 (cox14)
cytochrome c oxidase assembly homolog 14 (S. cerevisiae) 		ENSDART00000143052 (cox14-001) 5676344-5680471 protein_coding
ENSDARG00000094694 (si:dkey-222f2.6)
si:dkey-222f2.6 		ENSDART00000141003 (si:dkey-222f2.6-001) 5734964-5736541 processed_transcript

Danio rerio Ensembl (Zv9)

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CIL_00033M_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000178449-ENSG00000139624 CGP 9606 12:50111979-50167533
GeneTranscriptPositionBiotype
ENSG00000139624 (CERS5)
ceramide synthase 5 		ENST00000317551 (CERS5-001) 50129798-50167422 protein_coding
ENST00000380189 (CERS5-003) 50129798-50167320 nonsense_mediated_decay
ENST00000422340 (CERS5-201) 50129306-50167533 protein_coding
ENST00000438450 (CERS5-002) 50134620-50167393 nonsense_mediated_decay
ENST00000542320 (CERS5-026) 50135519-50167300 nonsense_mediated_decay
ENST00000546406 (CERS5-018) 50129858-50133165 retained_intron
ENST00000546514 (CERS5-012) 50143165-50167359 nonsense_mediated_decay
ENST00000546676 (CERS5-022) 50135440-50137793 retained_intron
ENST00000547138 (CERS5-024) 50135406-50137816 processed_transcript
ENST00000547455 (CERS5-011) 50143138-50167369 nonsense_mediated_decay
ENST00000547787 (CERS5-004) 50129799-50167303 nonsense_mediated_decay
ENST00000547800 (CERS5-020) 50135732-50167343 protein_coding
ENST00000547852 (CERS5-007) 50165936-50167300 processed_transcript
ENST00000548930 (CERS5-009) 50142080-50144499 processed_transcript
ENST00000548942 (CERS5-023) 50133785-50135537 processed_transcript
ENST00000549089 (CERS5-015) 50135958-50143372 retained_intron
ENST00000549389 (CERS5-010) 50143074-50167328 nonsense_mediated_decay
ENST00000549942 (CERS5-013) 50144019-50167505 processed_transcript
ENST00000550079 (CERS5-021) 50130413-50134828 retained_intron
ENST00000550258 (CERS5-008) 50143080-50167326 nonsense_mediated_decay
ENST00000550547 (CERS5-016) 50134573-50142093 protein_coding
ENST00000550899 (CERS5-025) 50144349-50167369 nonsense_mediated_decay
ENST00000550919 (CERS5-019) 50129798-50136013 protein_coding
ENST00000551005 (CERS5-005) 50129799-50144136 retained_intron
ENST00000551384 (CERS5-014) 50143072-50144371 retained_intron
ENST00000551697 (CERS5-027) 50129792-50167302 nonsense_mediated_decay
ENST00000551757 (CERS5-028) 50133079-50134706 retained_intron
ENST00000553122 (CERS5-017) 50129798-50135792 protein_coding
ENSG00000272368 (RP4-605O3.4)
 ENST00000548468 (RP4-605O3.4-001) 50112197-50165618 antisense
ENST00000552815 (RP4-605O3.4-002) 50112254-50123782 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_00033M_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023020-ENSMUSG00000023021 CGP 10090 15:99725618-99772885
GeneTranscriptPositionBiotype
ENSMUSG00000023020 (Cox14)
cytochrome c oxidase assembly protein 14 		ENSMUST00000023761 (Cox14-201) 99725618-99728136 protein_coding
ENSMUSG00000023021 (Cers5)
ceramide synthase 5 		ENSMUST00000023762 (Cers5-001) 99735592-99772601 protein_coding
ENSMUST00000109035 (Cers5-002) 99734881-99772462 protein_coding
ENSMUST00000175876 (Cers5-003) 99739408-99772885 protein_coding
ENSMUST00000176248 (Cers5-007) 99735311-99772465 nonsense_mediated_decay
ENSMUST00000176627 (Cers5-004) 99745942-99772092 protein_coding
ENSMUST00000176970 (Cers5-006) 99737335-99747070 protein_coding
ENSMUSG00000090406 (Gm17058)
predicted gene 17058 		ENSMUST00000168951 (Gm17058-001) 99765991-99782332 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00033M_0001ENSDARG00000002365ENSDART00000011076ENSDARG00000092124ENSDART00000143052ENSDARG00000094694ENSDART00000141003CIL_00033M_0002ENSG00000139624ENST00000317551ENST00000380189ENST00000422340ENST00000438450ENST00000542320ENST00000546406ENST00000546514ENST00000546676ENST00000547138ENST00000547455ENST00000547787ENST00000547800ENST00000547852ENST00000548930ENST00000548942ENST00000549089ENST00000549389ENST00000549942ENST00000550079ENST00000550258ENST00000550547ENST00000550899ENST00000550919ENST00000551005ENST00000551384ENST00000551697ENST00000551757ENST00000553122ENSG00000272368ENST00000548468ENST00000552815CIL_00033M_0003ENSMUSG00000023020ENSMUST00000023761ENSMUSG00000023021ENSMUST00000023762ENSMUST00000109035ENSMUST00000175876ENSMUST00000176248ENSMUST00000176627ENSMUST00000176970ENSMUSG00000090406ENSMUST00000168951
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00033M_0001ENSDARG00000002365ENSDART00000011076ENSDARG00000092124ENSDART00000143052ENSDARG00000094694ENSDART00000141003CIL_00033M_0002ENSG00000139624ENST00000317551ENST00000380189ENST00000422340ENST00000438450ENST00000546406ENST00000550079ENST00000550547ENST00000550899ENST00000550919ENST00000551005ENST00000551757ENST00000553122ENSG00000272368ENST00000548468CIL_00033M_0003ENSMUSG00000023020ENSMUST00000023761ENSMUSG00000023021ENSMUST00000023762ENSMUST00000109035ENSMUST00000175876ENSMUST00000176248ENSMUST00000176627ENSMUSG00000090406ENSMUST00000168951
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002365 ENSDART00000011076 N/A N/A N/A 3.089±1.80 N/A N/A 2.120±1.18 3.615±1.99 0.626±0.00 N/A 1.969±0.00 N/A N/A N/A
ENSDARG00000092124 ENSDART00000143052 N/A N/A N/A 16.170±15.49 N/A N/A 62.584±30.12 7.986±0.00 5.302±0.00 N/A 34.130±0.00 N/A N/A N/A
ENSDARG00000094694 ENSDART00000141003 N/A N/A N/A 0.443±0.17 N/A N/A 1.249±0.00 0.337±0.15 0.179±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000139624 ENST00000317551 9.812±0.00 7.262±0.00 0.818±0.00 4.263±0.00 4.605±3.31 3.811±1.83 1.824±0.00 5.120±4.44 1.398±0.52 3.263±2.04 0.562±0.00 11.505±8.85 13.191±1.58 7.035±2.17
ENST00000380189 N/A N/A 1.210±0.00 N/A N/A N/A N/A N/A 0.419±0.00 N/A N/A N/A N/A N/A
ENST00000422340 1.980±0.00 3.589±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438450 N/A N/A N/A 1.949±0.00 N/A N/A N/A N/A N/A N/A 0.873±0.00 15.116±0.00 N/A N/A
ENST00000542320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546406 N/A N/A N/A 7.482±0.00 N/A N/A N/A N/A N/A N/A 1.321±0.00 16.563±0.00 N/A 6.729±0.00
ENST00000546514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547138 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549089 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550079 N/A N/A N/A N/A 3.178±0.00 N/A N/A N/A 2.917±0.00 N/A N/A 27.805±0.00 17.899±0.00 11.004±0.00
ENST00000550258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550547 N/A N/A N/A N/A N/A N/A N/A N/A 5.428±0.00 N/A N/A N/A 26.800±0.00 17.249±0.00
ENST00000550899 N/A N/A N/A N/A N/A N/A 5.363±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000550919 4.688±0.00 N/A N/A N/A N/A 5.829±0.00 N/A N/A N/A 4.340±0.00 N/A N/A 8.576±0.00 N/A
ENST00000551005 N/A N/A N/A N/A N/A N/A N/A N/A 0.474±0.00 N/A N/A N/A N/A N/A
ENST00000551384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551757 N/A N/A N/A 1.263±0.00 N/A N/A N/A N/A N/A N/A 0.478±0.00 N/A N/A N/A
ENST00000553122 N/A N/A N/A 3.674±1.80 N/A 3.902±0.00 N/A N/A 1.717±0.00 N/A 1.441±0.00 N/A N/A N/A
ENSG00000272368 ENST00000548468 N/A N/A 0.449±0.00 N/A N/A N/A N/A N/A N/A 0.642±0.00 N/A N/A N/A N/A
ENST00000552815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023020 ENSMUST00000023761 84.783±19.68 346.744±44.20 64.630±16.96 58.185±25.46 99.244±44.67 149.304±44.89 127.350±43.06 103.813±27.05 47.981±18.61 62.690±7.74 78.930±13.24 138.398±60.07 45.569±11.97 18.715±7.14
ENSMUSG00000023021 ENSMUST00000023762 15.043±4.73 23.632±4.57 15.043±1.59 10.939±5.76 21.477±6.26 13.429±2.03 6.745±1.13 13.956±1.20 2.470±1.95 16.877±4.05 2.646±0.51 27.663±7.34 26.209±10.16 8.741±3.53
ENSMUST00000109035 N/A N/A N/A N/A N/A N/A 1.710±0.59 N/A 0.107±0.00 N/A 0.281±0.05 N/A N/A 1.413±0.21
ENSMUST00000175876 N/A N/A N/A N/A N/A N/A N/A N/A 0.551±0.00 N/A N/A N/A N/A N/A
ENSMUST00000176248 N/A N/A N/A 1.632±0.00 N/A N/A N/A N/A 0.095±0.03 N/A N/A N/A N/A N/A
ENSMUST00000176627 N/A N/A N/A N/A N/A N/A N/A N/A 0.451±0.09 N/A N/A N/A N/A N/A
ENSMUST00000176970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000090406 ENSMUST00000168951 0.169±0.10 0.496±0.22 0.104±0.04 0.197±0.03 0.341±0.16 0.273±0.13 0.138±0.04 0.191±0.05 0.065±0.06 0.289±0.00 N/A 0.224±0.24 0.085±0.03 0.138±0.03

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