C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: G protein pathway suppressor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025156 Gps1 10090 + 11:120784272-120789102 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000100134 Gps1-001 120784275-120789097 protein_coding
  ENSMUST00000116305 Gps1-007 120784305-120789102 protein_coding
  ENSMUST00000132422 Gps1-003 120784272-120786333 retained_intron
  ENSMUST00000144519 Gps1-004 120786772-120787761 retained_intron
  ENSMUST00000153678 Gps1-006 120784275-120788783 nonsense_mediated_decay
  ENSMUST00000156723 Gps1-005 120787769-120788596 retained_intron
  ENSMUST00000172809 Gps1-002 120784515-120789102 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100134ENSMUST00000116305ENSMUST00000153678ENSMUST00000156723ENSMUST00000172809
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100134 15.142±4.09 14.204±1.13 18.578±2.10 26.212±14.00 14.840±1.33 12.767±1.76 6.557±1.15 10.912±2.31 9.616±5.14 15.092±1.92 5.504±1.18 25.978±7.90 10.187±3.39 12.097±0.51
ENSMUST00000116305 22.595±2.41 20.505±7.54 36.047±3.50 53.480±33.21 41.971±7.91 10.378±3.27 25.733±0.42 43.799±4.48 24.800±8.13 24.540±6.96 21.651±2.35 29.714±8.80 28.567±13.89 N/A
ENSMUST00000153678 N/A N/A N/A 15.846±0.00 N/A N/A N/A N/A N/A N/A N/A 20.678±0.00 20.479±5.71 23.519±0.00
ENSMUST00000156723 N/A N/A N/A N/A 37.805±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172809 30.952±9.66 65.389±13.80 8.394±1.53 8.176±0.00 31.969±11.80 37.955±1.79 N/A 12.561±3.95 14.815±4.67 16.631±5.67 N/A 90.448±19.29 15.133±0.51 71.392±33.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004VP CIL_0004VP_0002 CGP 11:120780746-120789102
CIL_0004VJ CIL_0004VJ_0002 CGP 11:120784272-120796403

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008180 IDA COP9 signalosome
GO:0010388 IEA cullin deneddylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040650 gps1 G protein pathway suppressor 1 protein_coding Danio_rerio
ENSG00000169727 GPS1 G protein pathway suppressor 1 protein_coding Homo_sapiens

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