C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: G protein pathway suppressor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153678 Gps1-006 ENSMUSG00000025156 10090 + 11:120784275-120788783 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000153678
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000153678 15.846±0.00 20.678±0.00 20.479±5.71 23.519±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004VP CIL_0004VP_0002 CGP 11:120780746-120789102
CIL_0004VJ CIL_0004VJ_0002 CGP 11:120784272-120796403

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0008180 IDA COP9 signalosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306823 GPS1-004 protein_coding Homo_sapiens 0 1605
ENST00000320548 GPS1-003 protein_coding Homo_sapiens 0 1801
ENST00000392357 GPS1-007 retained_intron Homo_sapiens 0 473
ENST00000392358 GPS1-006 protein_coding Homo_sapiens 0 1736
ENST00000578168 GPS1-024 protein_coding Homo_sapiens 8e-22 108
ENST00000578279 GPS1-023 retained_intron Homo_sapiens 0 490
ENST00000578392 GPS1-019 nonsense_mediated_decay Homo_sapiens 9e-16 88
ENST00000578552 GPS1-001 protein_coding Homo_sapiens 0 1661
ENST00000578642 GPS1-015 retained_intron Homo_sapiens 0.00000000000005 82
ENST00000580141 GPS1-016 nonsense_mediated_decay Homo_sapiens 0 966
ENST00000580627 GPS1-018 nonsense_mediated_decay Homo_sapiens 0.00000000000004 82
ENST00000580716 GPS1-010 protein_coding Homo_sapiens 0 518
ENST00000580723 GPS1-021 nonsense_mediated_decay Homo_sapiens 0 518
ENST00000581418 GPS1-017 protein_coding Homo_sapiens 0 621
ENST00000581578 GPS1-013 protein_coding Homo_sapiens 0 424
ENST00000583486 GPS1-025 retained_intron Homo_sapiens 0 289
ENST00000583641 GPS1-012 protein_coding Homo_sapiens 0 654
ENST00000583885 GPS1-014 protein_coding Homo_sapiens 0.00000000000001 84
ENST00000584229 GPS1-020 processed_transcript Homo_sapiens 4e-29 132
ENST00000584460 GPS1-005 nonsense_mediated_decay Homo_sapiens 0 1605
ENST00000585084 GPS1-009 protein_coding Homo_sapiens 0 734
ENST00000623691 GPS1-028 protein_coding Homo_sapiens 0 1640
ENST00000623761 GPS1-029 protein_coding Homo_sapiens 0 1716
ENST00000624957 GPS1-027 protein_coding Homo_sapiens 0 1585

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