C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G protein pathway suppressor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000116305 Gps1-007 ENSMUSG00000025156 10090 + 11:120784305-120789102 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000116305
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000116305 22.595±2.41 20.505±7.54 36.047±3.50 53.480±33.21 41.971±7.91 10.378±3.27 25.733±0.42 43.799±4.48 24.800±8.13 24.540±6.96 21.651±2.35 29.714±8.80 28.567±13.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004VP CIL_0004VP_0002 CGP 11:120780746-120789102
CIL_0004VJ CIL_0004VJ_0002 CGP 11:120784272-120796403

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0008180 IDA COP9 signalosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306823 GPS1-004 protein_coding Homo_sapiens 0 1668
ENST00000320548 GPS1-003 protein_coding Homo_sapiens 0 1661
ENST00000392357 GPS1-007 retained_intron Homo_sapiens 0 473
ENST00000392358 GPS1-006 protein_coding Homo_sapiens 0 1661
ENST00000578168 GPS1-024 protein_coding Homo_sapiens 8e-22 108
ENST00000578279 GPS1-023 retained_intron Homo_sapiens 0 490
ENST00000578392 GPS1-019 nonsense_mediated_decay Homo_sapiens 0.000000001 68
ENST00000578552 GPS1-001 protein_coding Homo_sapiens 0 1724
ENST00000578642 GPS1-015 retained_intron Homo_sapiens 6.99949e-42 174
ENST00000580141 GPS1-016 nonsense_mediated_decay Homo_sapiens 0 974
ENST00000580627 GPS1-018 nonsense_mediated_decay Homo_sapiens 0 418
ENST00000580716 GPS1-010 protein_coding Homo_sapiens 0 520
ENST00000580723 GPS1-021 nonsense_mediated_decay Homo_sapiens 0 525
ENST00000581418 GPS1-017 protein_coding Homo_sapiens 0.000000001 68
ENST00000581578 GPS1-013 protein_coding Homo_sapiens 0.000000001 68
ENST00000583486 GPS1-025 retained_intron Homo_sapiens 0 289
ENST00000583641 GPS1-012 protein_coding Homo_sapiens 0 579
ENST00000583885 GPS1-014 protein_coding Homo_sapiens 0.000000001 68
ENST00000584229 GPS1-020 processed_transcript Homo_sapiens 0.000000001 68
ENST00000584460 GPS1-005 nonsense_mediated_decay Homo_sapiens 0 1613
ENST00000585084 GPS1-009 protein_coding Homo_sapiens 0 736
ENST00000623691 GPS1-028 protein_coding Homo_sapiens 0 1703
ENST00000623761 GPS1-029 protein_coding Homo_sapiens 0 1640
ENST00000624957 GPS1-027 protein_coding Homo_sapiens 0 1648

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