C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G protein pathway suppressor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172809 Gps1-002 ENSMUSG00000025156 10090 + 11:120784515-120789102 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000172809
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000172809 30.952±9.66 65.389±13.80 8.394±1.53 8.176±0.00 31.969±11.80 37.955±1.79 12.561±3.95 14.815±4.67 16.631±5.67 90.448±19.29 15.133±0.51 71.392±33.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004VP CIL_0004VP_0002 CGP 11:120780746-120789102
CIL_0004VJ CIL_0004VJ_0002 CGP 11:120784272-120796403

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008180 IDA COP9 signalosome
GO:0010388 IEA cullin deneddylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306823 GPS1-004 protein_coding Homo_sapiens 0 1605
ENST00000320548 GPS1-003 protein_coding Homo_sapiens 0 1736
ENST00000392357 GPS1-007 retained_intron Homo_sapiens 0 473
ENST00000392358 GPS1-006 protein_coding Homo_sapiens 0 1757
ENST00000578168 GPS1-024 protein_coding Homo_sapiens 8e-22 108
ENST00000578279 GPS1-023 retained_intron Homo_sapiens 0 490
ENST00000578552 GPS1-001 protein_coding Homo_sapiens 0 1661
ENST00000580141 GPS1-016 nonsense_mediated_decay Homo_sapiens 0 966
ENST00000580716 GPS1-010 protein_coding Homo_sapiens 0 518
ENST00000580723 GPS1-021 nonsense_mediated_decay Homo_sapiens 0 518
ENST00000583486 GPS1-025 retained_intron Homo_sapiens 0 289
ENST00000583641 GPS1-012 protein_coding Homo_sapiens 0 675
ENST00000584460 GPS1-005 nonsense_mediated_decay Homo_sapiens 0 1605
ENST00000585084 GPS1-009 protein_coding Homo_sapiens 0 734
ENST00000623691 GPS1-028 protein_coding Homo_sapiens 0 1640
ENST00000623761 GPS1-029 protein_coding Homo_sapiens 0 1738
ENST00000624957 GPS1-027 protein_coding Homo_sapiens 0 1585

Loading