C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: interferon induced transmembrane protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025491 Ifitm1 10090 + 7:140967221-140969825 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026564 Ifitm1-003 140968040-140969825 protein_coding
  ENSMUST00000106040 Ifitm1-002 140968028-140969825 protein_coding
  ENSMUST00000106042 Ifitm1-001 140967221-140969825 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026564ENSMUST00000106040ENSMUST00000106042
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026564 68.535±65.81 3.377±1.32 35.845±4.92 0.803±0.00 9.083±1.82 7.984±1.42 2.914±1.41 17.441±1.42 6.865±3.27 19.744±2.36 0.361±0.09 45.493±26.40 5.582±2.67 0.590±0.14
ENSMUST00000106040 169.526±161.19 8.244±2.86 98.883±27.60 6.053±4.37 44.353±3.66 36.714±5.37 8.774±6.68 32.770±4.55 24.841±5.07 84.901±2.05 1.094±0.94 293.562±165.97 12.960±7.04 2.023±1.30
ENSMUST00000106042 2.062±0.22 1.075±0.00 N/A N/A 4.481±1.08 N/A 0.633±0.02 N/A 2.333±0.00 N/A 0.360±0.18 0.611±0.00 N/A 0.198±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002UG CIL_0002UG_0004 CGP 7:140954839-140969825
CIL_0002UG CIL_0002UG_0003 CGP 7:140967221-141010770

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001503 IEA ossification
GO:0001756 IMP somitogenesis
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005886 IEA plasma membrane
GO:0008285 ISS negative regulation of cell proliferation
GO:0009615 IDA response to virus
GO:0009952 IMP anterior/posterior pattern specification
GO:0016021 IEA integral component of membrane
GO:0030336 ISS negative regulation of cell migration
GO:0034341 ISS response to interferon-gamma
GO:0035455 ISS response to interferon-alpha
GO:0035456 ISS response to interferon-beta
GO:0045071 ISS negative regulation of viral genome replication
GO:0045669 ISS positive regulation of osteoblast differentiation
GO:0046597 IDA negative regulation of viral entry into host cell
GO:0051607 IDA defense response to virus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000093303 si:dkey-226m8.7 interferon induced transmembrane protein 3 protein_coding Danio_rerio
ENSG00000142089 IFITM3 interferon induced transmembrane protein 3 protein_coding Homo_sapiens
ENSG00000185201 IFITM2 interferon induced transmembrane protein 2 protein_coding Homo_sapiens
ENSG00000185885 IFITM1 interferon induced transmembrane protein 1 protein_coding Homo_sapiens

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