C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002UG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185201-ENSG00000185201 CGP 9606 11:307631-315272
GeneTranscriptPositionBiotype
ENSG00000185885 (IFITM1)
interferon induced transmembrane protein 1 		ENST00000328221 (IFITM1-003) 313527-315240 protein_coding
ENST00000408968 (IFITM1-001) 313853-315272 protein_coding
ENST00000525554 (IFITM1-004) 314418-314962 processed_transcript
ENST00000528780 (IFITM1-002) 313506-315272 protein_coding
ENSG00000254910 (RP11-326C3.7)
 ENST00000526612 (RP11-326C3.7-001) 310139-311141 antisense
CIL_0002UG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185885-ENSG00000142089 CGP 9606 11:313506-327537
GeneTranscriptPositionBiotype
ENSG00000142089 (IFITM3)
interferon induced transmembrane protein 3 		ENST00000399808 (IFITM3-001) 319669-321050 protein_coding
ENST00000526811 (IFITM3-002) 319773-321340 protein_coding
ENST00000531688 (IFITM3-003) 319746-320683 nonsense_mediated_decay
ENST00000602735 (IFITM3-004) 319773-327537 protein_coding
ENSG00000185885 (IFITM1)
interferon induced transmembrane protein 1 		ENST00000328221 (IFITM1-003) 313527-315240 protein_coding
ENST00000408968 (IFITM1-001) 313853-315272 protein_coding
ENST00000525554 (IFITM1-004) 314418-314962 processed_transcript
ENST00000528780 (IFITM1-002) 313506-315272 protein_coding
ENSG00000255089 (RP11-326C3.10)
 ENST00000534271 (RP11-326C3.10-001) 321991-322426 antisense
ENSG00000270030 (RP11-326C3.13)
 ENST00000602949 (RP11-326C3.13-001) 325703-326294 lincRNA
ENSG00000270105 (RP11-326C3.14)
 ENST00000602809 (RP11-326C3.14-001) 322186-322727 lincRNA
CIL_0002UG_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025491-ENSMUSG00000025492 CGP 10090 7:140967221-141010770
GeneTranscriptPositionBiotype
ENSMUSG00000025491 (Ifitm1)
interferon induced transmembrane protein 1 		ENSMUST00000026564 (Ifitm1-003) 140968040-140969825 protein_coding
ENSMUST00000106040 (Ifitm1-002) 140968028-140969825 protein_coding
ENSMUST00000106042 (Ifitm1-001) 140967221-140969825 protein_coding
ENSMUSG00000025492 (Ifitm3)
interferon induced transmembrane protein 3 		ENSMUST00000026565 (Ifitm3-001) 141009586-141010770 protein_coding
CIL_0002UG_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000060591-ENSMUSG00000025491 CGP 10090 7:140954839-140969825
GeneTranscriptPositionBiotype
ENSMUSG00000025491 (Ifitm1)
interferon induced transmembrane protein 1 		ENSMUST00000026564 (Ifitm1-003) 140968040-140969825 protein_coding
ENSMUST00000106040 (Ifitm1-002) 140968028-140969825 protein_coding
ENSMUST00000106042 (Ifitm1-001) 140967221-140969825 protein_coding
ENSMUSG00000060591 (Ifitm2)
interferon induced transmembrane protein 2 		ENSMUST00000081649 (Ifitm2-201) 140954839-140955961 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002UG_0001ENSG00000185885ENST00000328221ENST00000408968ENST00000525554ENST00000528780ENSG00000254910ENST00000526612CIL_0002UG_0002ENSG00000142089ENST00000399808ENST00000526811ENST00000531688ENST00000602735ENSG00000185885ENST00000328221ENST00000408968ENST00000525554ENST00000528780ENSG00000255089ENST00000534271ENSG00000270030ENST00000602949ENSG00000270105ENST00000602809CIL_0002UG_0003ENSMUSG00000025491ENSMUST00000026564ENSMUST00000106040ENSMUST00000106042ENSMUSG00000025492ENSMUST00000026565CIL_0002UG_0004ENSMUSG00000025491ENSMUST00000026564ENSMUST00000106040ENSMUST00000106042ENSMUSG00000060591ENSMUST00000081649
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002UG_0001ENSG00000185885ENST00000328221ENST00000408968ENST00000528780ENSG00000254910ENST00000526612CIL_0002UG_0002ENSG00000142089ENST00000399808ENST00000526811ENSG00000185885ENST00000328221ENST00000408968ENST00000528780ENSG00000255089ENST00000534271ENSG00000270030ENST00000602949ENSG00000270105ENST00000602809CIL_0002UG_0003ENSMUSG00000025491ENSMUST00000026564ENSMUST00000106040ENSMUST00000106042ENSMUSG00000025492ENSMUST00000026565CIL_0002UG_0004ENSMUSG00000025491ENSMUST00000026564ENSMUST00000106040ENSMUST00000106042ENSMUSG00000060591ENSMUST00000081649
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000185885 ENST00000328221 75.033±0.00 143.171±0.00 N/A 20.914±0.00 71.953±0.00 121.879±0.00 65.031±0.00 81.210±0.00 N/A 234.993±0.00 24.038±20.85 120.757±0.00 57.960±0.00 132.230±0.00
ENST00000408968 109.748±0.00 66.237±0.00 1.150±0.00 9.620±5.87 18.644±0.00 7.077±0.00 4.215±0.00 9.996±0.00 5.347±0.00 9.787±0.00 N/A 110.037±127.26 23.107±0.00 5.702±0.00
ENST00000525554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 122.876±0.00 78.546±11.79 N/A
ENSG00000254910 ENST00000526612 N/A 3.896±0.00 N/A N/A N/A N/A N/A N/A 0.095±0.00 4.255±0.00 N/A 1.698±1.49 0.179±0.00 0.273±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000142089 ENST00000399808 527.862±0.00 654.303±0.00 4.912±0.00 72.549±67.90 89.765±82.47 273.561±269.12 38.652±35.06 182.530±139.19 198.142±192.08 242.970±231.89 28.277±16.74 167.419±143.16 559.676±368.16 195.193±173.80
ENST00000526811 N/A N/A N/A N/A 2.365±0.00 N/A 41.254±0.00 N/A N/A N/A 27.674±0.00 189.316±47.94 386.271±121.09 49.143±0.00
ENST00000531688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000185885 ENST00000328221 75.033±0.00 143.171±0.00 N/A 20.914±0.00 71.953±0.00 121.879±0.00 65.031±0.00 81.210±0.00 N/A 234.993±0.00 24.038±20.85 120.757±0.00 57.960±0.00 132.230±0.00
ENST00000408968 109.748±0.00 66.237±0.00 1.150±0.00 9.620±5.87 18.644±0.00 7.077±0.00 4.215±0.00 9.996±0.00 5.347±0.00 9.787±0.00 N/A 110.037±127.26 23.107±0.00 5.702±0.00
ENST00000525554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 122.876±0.00 78.546±11.79 N/A
ENSG00000255089 ENST00000534271 0.076±0.00 0.077±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.327±0.00 N/A 0.073±0.00
ENSG00000270030 ENST00000602949 0.100±0.00 0.509±0.00 N/A 0.122±0.00 0.118±0.00 0.286±0.00 0.305±0.00 0.113±0.00 0.669±0.00 0.035±0.00 0.314±0.19 0.314±0.10 0.309±0.19 0.719±0.00
ENSG00000270105 ENST00000602809 N/A 0.230±0.00 N/A 0.548±0.00 0.094±0.00 N/A 0.136±0.00 N/A 0.168±0.00 0.262±0.00 N/A N/A N/A 0.081±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025491 ENSMUST00000026564 68.535±65.81 3.377±1.32 35.845±4.92 0.803±0.00 9.083±1.82 7.984±1.42 2.914±1.41 17.441±1.42 6.865±3.27 19.744±2.36 0.361±0.09 45.493±26.40 5.582±2.67 0.590±0.14
ENSMUST00000106040 169.526±161.19 8.244±2.86 98.883±27.60 6.053±4.37 44.353±3.66 36.714±5.37 8.774±6.68 32.770±4.55 24.841±5.07 84.901±2.05 1.094±0.94 293.562±165.97 12.960±7.04 2.023±1.30
ENSMUST00000106042 2.062±0.22 1.075±0.00 N/A N/A 4.481±1.08 N/A 0.633±0.02 N/A 2.333±0.00 N/A 0.360±0.18 0.611±0.00 N/A 0.198±0.04
ENSMUSG00000025492 ENSMUST00000026565 389.284±120.58 84.028±4.58 275.232±1.92 5.424±1.96 264.293±62.82 77.904±6.92 106.371±9.66 122.250±11.40 297.174±246.79 310.703±9.71 28.981±1.63 262.519±94.58 43.380±31.06 7.481±3.70
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025491 ENSMUST00000026564 68.535±65.81 3.377±1.32 35.845±4.92 0.803±0.00 9.083±1.82 7.984±1.42 2.914±1.41 17.441±1.42 6.865±3.27 19.744±2.36 0.361±0.09 45.493±26.40 5.582±2.67 0.590±0.14
ENSMUST00000106040 169.526±161.19 8.244±2.86 98.883±27.60 6.053±4.37 44.353±3.66 36.714±5.37 8.774±6.68 32.770±4.55 24.841±5.07 84.901±2.05 1.094±0.94 293.562±165.97 12.960±7.04 2.023±1.30
ENSMUST00000106042 2.062±0.22 1.075±0.00 N/A N/A 4.481±1.08 N/A 0.633±0.02 N/A 2.333±0.00 N/A 0.360±0.18 0.611±0.00 N/A 0.198±0.04
ENSMUSG00000060591 ENSMUST00000081649 411.799±203.01 565.753±26.58 398.182±43.26 39.163±28.11 466.618±119.20 321.507±65.00 127.150±19.91 284.543±26.10 400.821±138.66 490.107±202.49 32.291±3.32 687.075±302.69 41.006±30.78 17.159±9.23

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