C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chitinase domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166082 Chid1-202 ENSMUSG00000025512 10090 - 7:141493137-141539857 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonLiverMuscleOvaryTestisENSMUST00000166082
Transcript ID Adipose Adrenal Brain Colon Liver Muscle Ovary Testis
ENSMUST00000166082 5.328±0.62 10.079±0.00 2.307±0.00 4.407±1.44 4.484±1.67 1.005±0.00 14.692±2.42 7.970±0.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003EQ CIL_0003EQ_0002 CGP 7:141471860-141493427
CIL_0003ER CIL_0003ER_0002 CGP 7:141475240-141539857
CIL_0003EW CIL_0003EW_0002 CGP 7:141493136-141633011

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004553 IEA hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004568 IEA chitinase activity
GO:0005515 IEA protein binding
GO:0005615 IEA extracellular space
GO:0005634 IEA nucleus
GO:0005764 IEA lysosome
GO:0005770 IEA late endosome
GO:0005802 IEA trans-Golgi network
GO:0005975 IEA carbohydrate metabolic process
GO:0006032 IEA chitin catabolic process
GO:0016020 IEA membrane
GO:0045087 IEA innate immune response
GO:0070062 IEA extracellular vesicular exosome
GO:0070492 IEA oligosaccharide binding
GO:1900016 IEA negative regulation of cytokine production involved in inflammatory response

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323578 CHID1-001 protein_coding Homo_sapiens 0 1389
ENST00000429789 CHID1-003 protein_coding Homo_sapiens 0 765
ENST00000436108 CHID1-004 protein_coding Homo_sapiens 0 1365
ENST00000449825 CHID1-201 protein_coding Homo_sapiens 0 1365
ENST00000454838 CHID1-202 protein_coding Homo_sapiens 0 1223
ENST00000524832 CHID1-012 processed_transcript Homo_sapiens 0 776
ENST00000525225 CHID1-011 protein_coding Homo_sapiens 0 289
ENST00000525840 CHID1-008 protein_coding Homo_sapiens 1e-33 147
ENST00000526714 CHID1-020 processed_transcript Homo_sapiens 0 830
ENST00000528426 CHID1-010 nonsense_mediated_decay Homo_sapiens 0 590
ENST00000528581 CHID1-002 protein_coding Homo_sapiens 0 1223
ENST00000530939 CHID1-009 protein_coding Homo_sapiens 0 433
ENST00000531859 CHID1-015 protein_coding Homo_sapiens 0 460
ENST00000533056 CHID1-005 protein_coding Homo_sapiens 0 483
ENST00000533059 CHID1-006 protein_coding Homo_sapiens 0 446
ENST00000534254 CHID1-018 nonsense_mediated_decay Homo_sapiens 0 483

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