C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chitinase domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153191 Chid1-001 ENSMUSG00000025512 10090 - 7:141493136-141539816 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000153191
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000153191 7.414±2.42 14.584±0.00 6.236±0.84 4.735±1.39 7.989±1.02 6.766±1.69 4.288±0.35 8.705±0.96 5.829±2.49 6.548±1.30 1.260±0.25 8.484±4.79 10.691±2.68 4.517±3.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003EQ CIL_0003EQ_0002 CGP 7:141471860-141493427
CIL_0003ER CIL_0003ER_0002 CGP 7:141475240-141539857
CIL_0003EW CIL_0003EW_0002 CGP 7:141493136-141633011

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004553 IEA hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004568 IEA chitinase activity
GO:0005975 IEA carbohydrate metabolic process
GO:0006032 IEA chitin catabolic process
GO:0045087 IEA innate immune response

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323578 CHID1-001 protein_coding Homo_sapiens 0 1386
ENST00000429789 CHID1-003 protein_coding Homo_sapiens 0 763
ENST00000436108 CHID1-004 protein_coding Homo_sapiens 0 1365
ENST00000449825 CHID1-201 protein_coding Homo_sapiens 0 1365
ENST00000454838 CHID1-202 protein_coding Homo_sapiens 0 1223
ENST00000524832 CHID1-012 processed_transcript Homo_sapiens 0 776
ENST00000525225 CHID1-011 protein_coding Homo_sapiens 0 289
ENST00000525840 CHID1-008 protein_coding Homo_sapiens 1e-33 147
ENST00000526714 CHID1-020 processed_transcript Homo_sapiens 0 830
ENST00000528426 CHID1-010 nonsense_mediated_decay Homo_sapiens 0 590
ENST00000528581 CHID1-002 protein_coding Homo_sapiens 0 1223
ENST00000530939 CHID1-009 protein_coding Homo_sapiens 0 433
ENST00000531859 CHID1-015 protein_coding Homo_sapiens 0 460
ENST00000533056 CHID1-005 protein_coding Homo_sapiens 0 483
ENST00000533059 CHID1-006 protein_coding Homo_sapiens 0 446
ENST00000534254 CHID1-018 nonsense_mediated_decay Homo_sapiens 0 483

Loading