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Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: LanC (bacterial lantibiotic synthetase component C)-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027149 Lancl1-001 ENSMUSG00000026000 10090 - 1:67000517-67038865 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverOvaryENSMUST00000027149
Transcript ID Bladder Brain Liver Ovary
ENSMUST00000027149 3.012±0.53 2.226±0.00 1.337±0.29 1.084±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AJ CIL_0000AJ_0003 CGP 1:66924295-67038872
CIL_0006P4 CIL_0006P4_0002 CGP 1:67000517-67231259

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008152 IEA metabolic process
GO:0008270 ISS zinc ion binding
GO:0043295 ISS glutathione binding
GO:0050750 ISO low-density lipoprotein particle receptor binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000233714 LANCL1-004 protein_coding Homo_sapiens 0 1417
ENST00000431941 LANCL1-003 protein_coding Homo_sapiens 0 1397
ENST00000441020 LANCL1-007 protein_coding Homo_sapiens 0 1417
ENST00000443314 LANCL1-005 protein_coding Homo_sapiens 0 1417
ENST00000450366 LANCL1-001 protein_coding Homo_sapiens 0 1417

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