C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LanC (bacterial lantibiotic synthetase component C)-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119559 Lancl1-003 ENSMUSG00000026000 10090 - 1:67003375-67038834 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119559
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119559 11.703±0.83 33.106±11.56 43.531±10.11 18.265±8.46 5.827±0.88 9.712±2.42 15.322±2.53 9.538±3.37 7.035±1.56 19.258±2.23 18.299±6.07 13.787±1.40 231.751±85.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AJ CIL_0000AJ_0003 CGP 1:66924295-67038872
CIL_0006P4 CIL_0006P4_0002 CGP 1:67000517-67231259

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008152 IEA metabolic process
GO:0008270 ISS zinc ion binding
GO:0043295 ISS glutathione binding
GO:0050750 ISO low-density lipoprotein particle receptor binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000233714 LANCL1-004 protein_coding Homo_sapiens 0 1432
ENST00000431941 LANCL1-003 protein_coding Homo_sapiens 0 1397
ENST00000441020 LANCL1-007 protein_coding Homo_sapiens 0 1417
ENST00000443314 LANCL1-005 protein_coding Homo_sapiens 0 1417
ENST00000450366 LANCL1-001 protein_coding Homo_sapiens 0 1417

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