C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026229 Psmd1 10090 + 1:86064387-86139151 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027432 Psmd1-001 86064619-86139151 protein_coding
  ENSMUST00000127104 Psmd1-006 86064871-86075819 processed_transcript
  ENSMUST00000133480 Psmd1-005 86064692-86072284 retained_intron
  ENSMUST00000139715 Psmd1-002 86064619-86132749 nonsense_mediated_decay
  ENSMUST00000143200 Psmd1-003 86064387-86071660 processed_transcript
  ENSMUST00000147807 Psmd1-004 86064387-86070776 retained_intron
  ENSMUST00000149946 Psmd1-009 86127867-86132767 retained_intron
  ENSMUST00000152184 Psmd1-007 86110817-86132800 processed_transcript
  ENSMUST00000189234 Psmd1-010 86064641-86067662 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027432ENSMUST00000139715ENSMUST00000152184
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027432 17.962±4.37 N/A 23.533±1.15 33.197±4.07 9.115±3.20 4.923±0.00 12.397±3.07 17.435±1.76 20.695±11.08 12.345±2.22 28.045±3.76 28.042±10.76 41.340±17.93 14.442±2.66
ENSMUST00000139715 23.075±3.73 15.301±1.19 N/A 19.365±5.30 20.161±6.06 13.073±3.93 14.770±2.55 14.442±3.35 14.865±7.44 22.254±1.84 N/A 28.029±6.93 N/A 13.696±1.45
ENSMUST00000152184 19.060±0.00 N/A N/A N/A 26.530±6.05 N/A N/A 16.986±0.00 N/A N/A N/A 20.226±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00076M CIL_00076M_0002 CGP 1:86045863-86139151
CIL_0004KX CIL_0004KX_0003 CGP 1:86064387-86139151

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000502 IDA proteasome complex
GO:0005515 IPI protein binding
GO:0022624 IDA proteasome accessory complex
GO:0030234 IEA enzyme regulator activity
GO:0042176 IEA regulation of protein catabolic process
GO:0050790 IEA regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003189 psmd1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 protein_coding Danio_rerio
ENSG00000173692 PSMD1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 protein_coding Homo_sapiens

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