C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152184 Psmd1-007 ENSMUSG00000026229 10090 + 1:86110817-86132800 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastKidneyOvaryENSMUST00000152184
Transcript ID Adipose Breast Kidney Ovary
ENSMUST00000152184 19.060±0.00 26.530±6.05 16.986±0.00 20.226±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00076M CIL_00076M_0002 CGP 1:86045863-86139151
CIL_0004KX CIL_0004KX_0003 CGP 1:86064387-86139151

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308696 PSMD1-001 protein_coding Homo_sapiens 0 985
ENST00000373635 PSMD1-201 protein_coding Homo_sapiens 0 739
ENST00000409643 PSMD1-003 protein_coding Homo_sapiens 0 739
ENST00000431051 PSMD1-002 nonsense_mediated_decay Homo_sapiens 0 913
ENST00000467792 PSMD1-010 retained_intron Homo_sapiens 0 544
ENST00000619128 PSMD1-202 protein_coding Homo_sapiens 0 985

Loading