C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: THAP domain containing 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026279 Thap4 10090 - 1:93701935-93754864 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000112905 Thap4-002 93705390-93754864 nonsense_mediated_decay
  ENSMUST00000187445 Thap4-004 93705391-93714982 nonsense_mediated_decay
  ENSMUST00000189173 Thap4-003 93724649-93754650 retained_intron
  ENSMUST00000189472 Thap4-005 93714780-93749954 protein_coding
  ENSMUST00000189728 Thap4-006 93705387-93731926 processed_transcript
  ENSMUST00000190116 Thap4-001 93701935-93754780 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000112905ENSMUST00000189173ENSMUST00000189472ENSMUST00000189728ENSMUST00000190116
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000112905 N/A 3.025±1.45 N/A 1.899±0.73 N/A N/A N/A 3.712±0.00 1.264±0.70 N/A 2.081±0.00 4.974±1.18 5.710±1.15 N/A
ENSMUST00000189173 N/A N/A 4.497±0.00 3.339±0.19 0.922±0.00 N/A N/A N/A 1.578±0.22 1.726±0.32 N/A N/A 4.401±0.00 20.904±0.00
ENSMUST00000189472 4.121±0.80 13.493±1.70 N/A 5.418±0.07 6.664±0.72 12.799±0.00 N/A N/A 2.595±0.46 3.412±0.22 N/A 8.337±2.06 N/A N/A
ENSMUST00000189728 8.151±1.47 N/A 8.443±0.24 8.680±4.53 9.454±1.01 31.586±9.06 12.617±3.16 44.189±10.29 3.174±0.67 4.739±0.70 18.383±2.17 14.409±6.39 33.564±19.16 49.333±8.46
ENSMUST00000190116 N/A N/A N/A N/A N/A N/A N/A N/A 0.289±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004U9 CIL_0004U9_0003 CGP 1:93685660-93754864
CIL_0003ST CIL_0003ST_0002 CGP 1:93701935-93790610

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077323 thap4 THAP domain containing 4 protein_coding Danio_rerio
ENSG00000176946 THAP4 THAP domain containing 4 protein_coding Homo_sapiens

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