C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: THAP domain containing 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000176946 THAP4 9606 - 2:241584405-241637449 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000321679 THAP4-010 241584420-241602170 retained_intron
  ENST00000402136 THAP4-003 241584405-241617501 protein_coding
  ENST00000402545 THAP4-006 241584427-241617490 protein_coding
  ENST00000407315 THAP4-001 241584405-241637449 protein_coding
  ENST00000497486 THAP4-009 241591951-241602994 processed_transcript
  ENST00000612200 THAP4-201 241584428-241633364 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000402136ENST00000407315ENST00000612200
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000402136 N/A N/A N/A N/A N/A N/A 8.561±5.84 23.245±0.00 N/A N/A N/A N/A N/A N/A
ENST00000407315 24.805±0.00 13.533±0.00 1.584±0.00 17.992±0.00 10.755±8.31 11.791±7.39 10.023±8.01 10.496±8.36 7.103±3.46 8.971±6.83 26.537±25.23 29.055±15.50 21.107±2.23 31.428±1.20
ENST00000612200 26.620±0.00 N/A N/A N/A 18.916±0.00 15.249±0.00 N/A 22.007±0.00 N/A 12.861±0.00 7.212±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004U9 CIL_0004U9_0002 CGP 2:241558721-241637449
CIL_0003ST CIL_0003ST_0001 CGP 2:241584405-241673857

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077323 thap4 THAP domain containing 4 protein_coding Danio_rerio
ENSMUSG00000026279 Thap4 THAP domain containing 4 protein_coding Mus_musculus

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