C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004U9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000008807-ENSDARG00000077323 CGP 7955 2:22097859-22117094
GeneTranscriptPositionBiotype
ENSDARG00000008807 (bokb)
BCL2-related ovarian killer b 		ENSDART00000144890 (bokb-001) 22097859-22108079 protein_coding
ENSDARG00000077323 (thap4)
THAP domain containing 4 		ENSDART00000115025 (thap4-001) 22110767-22117094 protein_coding
CIL_0004U9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000176720-ENSG00000176946 CGP 9606 2:241558721-241637449
GeneTranscriptPositionBiotype
ENSG00000168397 (ATG4B)
autophagy related 4B, cysteine peptidase 		ENST00000344376 (ATG4B-005) 241651007-241672592 nonsense_mediated_decay
ENST00000400771 (ATG4B-025) 241637710-241668221 protein_coding
ENST00000400772 (ATG4B-011) 241637626-241655330 nonsense_mediated_decay
ENST00000402096 (ATG4B-006) 241637612-241672628 protein_coding
ENST00000404914 (ATG4B-002) 241637612-241673857 protein_coding
ENST00000405546 (ATG4B-001) 241637213-241673854 protein_coding
ENST00000415107 (ATG4B-022) 241637710-241653524 nonsense_mediated_decay
ENST00000419606 (ATG4B-015) 241637693-241655306 protein_coding
ENST00000425239 (ATG4B-023) 241637707-241659448 protein_coding
ENST00000428861 (ATG4B-027) 241666596-241671366 protein_coding
ENST00000429899 (ATG4B-026) 241653467-241666769 protein_coding
ENST00000430617 (ATG4B-020) 241637729-241659187 protein_coding
ENST00000460211 (ATG4B-028) 241667812-241671569 retained_intron
ENST00000465399 (ATG4B-016) 241637693-241655444 retained_intron
ENST00000468018 (ATG4B-021) 241637697-241659200 retained_intron
ENST00000475195 (ATG4B-014) 241637693-241655002 retained_intron
ENST00000475693 (ATG4B-008) 241668259-241673849 retained_intron
ENST00000479554 (ATG4B-013) 241637693-241654705 retained_intron
ENST00000479941 (ATG4B-030) 241668169-241668860 retained_intron
ENST00000482507 (ATG4B-004) 241637698-241672631 retained_intron
ENST00000483778 (ATG4B-012) 241637662-241659772 retained_intron
ENST00000491867 (ATG4B-010) 241637620-241653333 processed_transcript
ENST00000493618 (ATG4B-024) 241637706-241659611 retained_intron
ENST00000494132 (ATG4B-029) 241670561-241671917 retained_intron
ENST00000494465 (ATG4B-003) 241637635-241672599 retained_intron
ENSG00000176720 (BOK)
BCL2-related ovarian killer 		ENST00000318407 (BOK-001) 241558721-241574138 protein_coding
ENSG00000207186 (RNA5SP122)
RNA, 5S ribosomal pseudogene 122 		ENST00000384457 (RNA5SP122-201) 241584968-241585075 rRNA
ENSG00000273113 (RP11-367H1.1)
 ENST00000608316 (RP11-367H1.1-001) 241581922-241582726 lincRNA
CIL_0004U9_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026278-ENSMUSG00000026279 CGP 10090 1:93685660-93754864
GeneTranscriptPositionBiotype
ENSMUSG00000026278 (Bok)
BCL2-related ovarian killer 		ENSMUST00000027499 (Bok-001) 93685660-93695764 protein_coding
ENSMUST00000185685 (Bok-002) 93693817-93695455 processed_transcript
ENSMUST00000188394 (Bok-003) 93686263-93694070 protein_coding
ENSMUSG00000026279 (Thap4)
THAP domain containing 4 		ENSMUST00000112905 (Thap4-002) 93705390-93754864 nonsense_mediated_decay
ENSMUST00000187445 (Thap4-004) 93705391-93714982 nonsense_mediated_decay
ENSMUST00000189173 (Thap4-003) 93724649-93754650 retained_intron
ENSMUST00000189472 (Thap4-005) 93714780-93749954 protein_coding
ENSMUST00000189728 (Thap4-006) 93705387-93731926 processed_transcript
ENSMUST00000190116 (Thap4-001) 93701935-93754780 protein_coding
ENSMUSG00000026280 (Atg4b)
autophagy related 4B, cysteine peptidase 		ENSMUST00000027502 (Atg4b-001) 93754905-93790610 protein_coding
ENSMUST00000135762 (Atg4b-002) 93755045-93788179 retained_intron
ENSMUST00000149436 (Atg4b-003) 93751500-93775683 protein_coding
ENSMUST00000185482 (Atg4b-010) 93755035-93784923 nonsense_mediated_decay
ENSMUST00000185754 (Atg4b-008) 93786218-93787899 retained_intron
ENSMUST00000186001 (Atg4b-006) 93768077-93775448 retained_intron
ENSMUST00000186124 (Atg4b-009) 93785583-93786580 retained_intron
ENSMUST00000186811 (Atg4b-011) 93784797-93787877 nonsense_mediated_decay
ENSMUST00000187824 (Atg4b-005) 93754988-93778288 protein_coding
ENSMUST00000189152 (Atg4b-004) 93755162-93768100 processed_transcript
ENSMUST00000189872 (Atg4b-007) 93784343-93785081 retained_intron
ENSMUSG00000101952 (RP24-263F3.1)
predicted gene 10550 		ENSMUST00000188846 (RP24-263F3.1-001) 93731104-93751072 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004U9_0001ENSDARG00000008807ENSDART00000144890ENSDARG00000077323ENSDART00000115025CIL_0004U9_0002ENSG00000168397ENST00000344376ENST00000400771ENST00000400772ENST00000402096ENST00000404914ENST00000405546ENST00000415107ENST00000419606ENST00000425239ENST00000428861ENST00000429899ENST00000430617ENST00000460211ENST00000465399ENST00000468018ENST00000475195ENST00000475693ENST00000479554ENST00000479941ENST00000482507ENST00000483778ENST00000491867ENST00000493618ENST00000494132ENST00000494465ENSG00000176720ENST00000318407ENSG00000207186ENST00000384457ENSG00000273113ENST00000608316CIL_0004U9_0003ENSMUSG00000026278ENSMUST00000027499ENSMUST00000185685ENSMUST00000188394ENSMUSG00000026279ENSMUST00000112905ENSMUST00000187445ENSMUST00000189173ENSMUST00000189472ENSMUST00000189728ENSMUST00000190116ENSMUSG00000026280ENSMUST00000027502ENSMUST00000135762ENSMUST00000149436ENSMUST00000185482ENSMUST00000185754ENSMUST00000186001ENSMUST00000186124ENSMUST00000186811ENSMUST00000187824ENSMUST00000189152ENSMUST00000189872ENSMUSG00000101952ENSMUST00000188846
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004U9_0001ENSDARG00000008807ENSDART00000144890ENSDARG00000077323ENSDART00000115025CIL_0004U9_0002ENSG00000168397ENST00000344376ENST00000402096ENST00000404914ENST00000405546ENST00000419606ENST00000465399ENST00000475195ENST00000475693ENST00000482507ENSG00000176720ENST00000318407ENSG00000207186ENST00000384457ENSG00000273113ENST00000608316CIL_0004U9_0003ENSMUSG00000026278ENSMUST00000027499ENSMUST00000185685ENSMUST00000188394ENSMUSG00000026279ENSMUST00000112905ENSMUST00000189173ENSMUST00000189472ENSMUST00000189728ENSMUST00000190116ENSMUSG00000026280ENSMUST00000027502ENSMUST00000135762ENSMUST00000149436ENSMUST00000185482ENSMUST00000186811ENSMUSG00000101952ENSMUST00000188846
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000008807 ENSDART00000144890 N/A N/A N/A 0.428±0.23 N/A N/A 0.322±0.15 4.951±5.12 0.829±0.00 N/A 1.496±0.00 N/A N/A N/A
ENSDARG00000077323 ENSDART00000115025 N/A N/A N/A 5.564±2.71 N/A N/A 5.650±3.73 10.793±7.39 0.659±0.00 N/A 3.311±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000168397 ENST00000344376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.051±3.49 28.281±0.00
ENST00000400771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000400772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000402096 N/A N/A N/A N/A N/A N/A N/A N/A 4.686±0.00 N/A N/A N/A N/A 18.336±0.00
ENST00000404914 N/A 5.561±0.00 1.140±0.00 6.460±3.53 3.419±2.15 5.735±0.00 2.570±1.94 9.526±0.00 2.515±0.48 2.912±0.95 N/A 10.087±5.98 11.383±0.00 N/A
ENST00000405546 N/A N/A N/A N/A N/A N/A N/A 0.831±0.00 N/A N/A N/A N/A N/A N/A
ENST00000415107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419606 N/A N/A N/A N/A N/A N/A N/A 2.970±0.00 N/A N/A N/A N/A N/A N/A
ENST00000425239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465399 N/A N/A 8.595±0.00 11.727±0.00 12.513±0.00 9.724±0.00 2.531±0.00 6.200±0.00 9.821±0.00 9.547±0.00 5.485±0.00 6.438±0.00 N/A N/A
ENST00000468018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475195 N/A N/A N/A N/A N/A 6.798±0.00 N/A N/A N/A N/A N/A 5.942±0.00 N/A N/A
ENST00000475693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.242±0.00 N/A N/A N/A
ENST00000479554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482507 N/A 9.252±0.00 N/A N/A N/A N/A N/A 6.630±0.00 3.415±0.00 6.914±0.00 N/A 24.089±11.44 N/A 20.382±0.00
ENST00000483778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491867 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000176720 ENST00000318407 33.006±0.00 8.154±0.00 2.211±0.00 17.008±13.69 62.229±59.45 13.732±12.64 1.317±1.07 12.995±0.51 5.122±1.96 6.176±5.02 0.175±0.00 13.412±7.89 10.582±2.21 10.465±3.48
ENSG00000207186 ENST00000384457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.596±0.00
ENSG00000273113 ENST00000608316 N/A 0.273±0.00 N/A 0.156±0.00 0.159±0.07 0.482±0.00 0.054±0.00 N/A N/A 0.262±0.10 N/A 0.137±0.07 0.029±0.00 0.175±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026278 ENSMUST00000027499 22.854±4.58 18.887±9.14 23.331±1.74 16.033±6.77 8.567±4.54 25.939±3.41 2.273±0.25 23.172±2.28 2.066±0.86 4.267±0.80 0.649±0.27 44.503±20.88 18.125±23.80 2.143±1.02
ENSMUST00000185685 9.604±0.00 N/A N/A N/A N/A N/A N/A N/A 1.571±0.13 6.579±0.00 0.801±0.00 29.846±0.00 2.454±0.00 N/A
ENSMUST00000188394 N/A N/A N/A N/A 5.665±0.00 N/A N/A N/A N/A 4.882±0.00 N/A N/A 4.536±0.00 N/A
ENSMUSG00000026279 ENSMUST00000112905 N/A 3.025±1.45 N/A 1.899±0.73 N/A N/A N/A 3.712±0.00 1.264±0.70 N/A 2.081±0.00 4.974±1.18 5.710±1.15 N/A
ENSMUST00000187445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189173 N/A N/A 4.497±0.00 3.339±0.19 0.922±0.00 N/A N/A N/A 1.578±0.22 1.726±0.32 N/A N/A 4.401±0.00 20.904±0.00
ENSMUST00000189472 4.121±0.80 13.493±1.70 N/A 5.418±0.07 6.664±0.72 12.799±0.00 N/A N/A 2.595±0.46 3.412±0.22 N/A 8.337±2.06 N/A N/A
ENSMUST00000189728 8.151±1.47 N/A 8.443±0.24 8.680±4.53 9.454±1.01 31.586±9.06 12.617±3.16 44.189±10.29 3.174±0.67 4.739±0.70 18.383±2.17 14.409±6.39 33.564±19.16 49.333±8.46
ENSMUST00000190116 N/A N/A N/A N/A N/A N/A N/A N/A 0.289±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000026280 ENSMUST00000027502 5.623±0.45 6.860±1.54 14.957±3.39 12.981±5.98 3.649±0.78 7.743±1.55 2.664±0.30 5.479±0.90 7.962±4.13 5.199±0.52 3.211±0.39 5.394±1.96 7.334±5.70 3.690±2.31
ENSMUST00000135762 3.382±0.82 7.071±1.35 1.840±0.14 11.245±0.38 4.449±0.81 3.029±0.56 1.169±0.08 1.793±0.50 2.116±0.60 4.132±0.34 0.671±0.06 5.964±2.29 2.182±0.03 2.506±0.28
ENSMUST00000149436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 36.281±12.09 12.325±0.00
ENSMUST00000185482 N/A 26.195±2.49 9.244±1.25 16.426±0.00 11.756±0.30 13.823±1.75 5.328±0.00 10.799±0.00 9.684±4.04 N/A 4.702±0.86 21.681±2.04 27.845±10.67 7.397±1.83
ENSMUST00000185754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186811 N/A N/A N/A 31.524±0.00 N/A N/A N/A N/A N/A N/A N/A 37.730±0.00 45.426±5.83 11.230±0.00
ENSMUST00000187824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000101952 ENSMUST00000188846 4.224±1.45 5.047±0.73 6.053±1.69 4.259±0.69 3.068±0.99 N/A 3.525±0.24 N/A 2.928±0.59 3.209±0.32 6.364±0.45 7.169±3.37 14.332±9.09 31.003±12.90

Loading