C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: THAP domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112905 Thap4-002 ENSMUSG00000026279 10090 - 1:93705390-93754864 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainKidneyLiverMuscleOvaryPlacentaENSMUST00000112905
Transcript ID Adrenal Brain Kidney Liver Muscle Ovary Placenta
ENSMUST00000112905 3.025±1.45 1.899±0.73 3.712±0.00 1.264±0.70 2.081±0.00 4.974±1.18 5.710±1.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004U9 CIL_0004U9_0003 CGP 1:93685660-93754864
CIL_0003ST CIL_0003ST_0002 CGP 1:93701935-93790610

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000321679 THAP4-010 retained_intron Homo_sapiens 0 292
ENST00000402136 THAP4-003 protein_coding Homo_sapiens 0 625
ENST00000402545 THAP4-006 protein_coding Homo_sapiens 0 449
ENST00000407315 THAP4-001 protein_coding Homo_sapiens 0 957
ENST00000612200 THAP4-201 protein_coding Homo_sapiens 0 281

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