C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Ly6/Plaur domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026344 Lypd1 10090 - 1:125867622-125913101 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027582 Lypd1-002 125872318-125912928 protein_coding
  ENSMUST00000159417 Lypd1-001 125867622-125912214 protein_coding
  ENSMUST00000159529 Lypd1-004 125873101-125910908 protein_coding
  ENSMUST00000161361 Lypd1-005 125873519-125913101 protein_coding
  ENSMUST00000162899 Lypd1-003 125872284-125911387 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027582ENSMUST00000159417ENSMUST00000159529ENSMUST00000162899
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027582 1.170±0.00 N/A 9.764±1.84 14.473±5.04 0.153±0.01 4.485±0.80 0.899±0.05 1.441±0.37 1.508±0.46 2.077±0.21 0.036±0.01 2.921±0.95 1.109±0.93 4.501±2.07
ENSMUST00000159417 0.100±0.04 1.859±0.69 N/A 3.678±1.78 0.076±0.04 N/A 0.093±0.00 N/A N/A N/A N/A 0.537±0.30 0.018±0.00 N/A
ENSMUST00000159529 N/A N/A N/A 7.174±0.99 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162899 1.617±0.89 N/A 20.778±0.00 3.411±0.66 0.355±0.14 2.723±0.65 0.948±0.05 1.248±0.32 1.604±0.63 1.179±0.03 N/A 3.639±1.60 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001J2 CIL_0001J2_0002 CGP 1:125676995-125913101
CIL_0001W8 CIL_0001W8_0002 CGP 1:125867622-126830799

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0031225 IEA anchored component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000150551 LYPD1 LY6/PLAUR domain containing 1 protein_coding Homo_sapiens

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