C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ly6/Plaur domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027582 Lypd1-002 ENSMUSG00000026344 10090 - 1:125872318-125912928 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027582
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027582 1.170±0.00 9.764±1.84 14.473±5.04 0.153±0.01 4.485±0.80 0.899±0.05 1.441±0.37 1.508±0.46 2.077±0.21 0.036±0.01 2.921±0.95 1.109±0.93 4.501±2.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001J2 CIL_0001J2_0002 CGP 1:125676995-125913101
CIL_0001W8 CIL_0001W8_0002 CGP 1:125867622-126830799

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329321 GPR39-001 protein_coding Homo_sapiens 0 544
ENST00000345008 LYPD1-002 protein_coding Homo_sapiens 0 512
ENST00000397463 LYPD1-001 protein_coding Homo_sapiens 0 754
ENST00000449209 LYPD1-003 nonsense_mediated_decay Homo_sapiens 0 204
ENST00000470071 GPR39-002 processed_transcript Homo_sapiens 0 544

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