C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ly6/Plaur domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159417 Lypd1-001 ENSMUSG00000026344 10090 - 1:125867622-125912214 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartOvaryPlacentaENSMUST00000159417
Transcript ID Adipose Adrenal Brain Breast Heart Ovary Placenta
ENSMUST00000159417 0.100±0.04 1.859±0.69 3.678±1.78 0.076±0.04 0.093±0.00 0.537±0.30 0.018±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001J2 CIL_0001J2_0002 CGP 1:125676995-125913101
CIL_0001W8 CIL_0001W8_0002 CGP 1:125867622-126830799

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0031225 IEA anchored component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329321 GPR39-001 protein_coding Homo_sapiens 0 544
ENST00000345008 LYPD1-002 protein_coding Homo_sapiens 0 512
ENST00000397463 LYPD1-001 protein_coding Homo_sapiens 0 1107
ENST00000449209 LYPD1-003 nonsense_mediated_decay Homo_sapiens 0 204
ENST00000470071 GPR39-002 processed_transcript Homo_sapiens 0 544

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