C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001J2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000183840-ENSG00000150551 CGP 9606 2:132416574-132671579
GeneTranscriptPositionBiotype
ENSG00000150551 (LYPD1)
LY6/PLAUR domain containing 1 		ENST00000345008 (LYPD1-002) 132645787-132671579 protein_coding
ENST00000397463 (LYPD1-001) 132644853-132670205 protein_coding
ENST00000449209 (LYPD1-003) 132663026-132670200 nonsense_mediated_decay
ENSG00000183840 (GPR39)
G protein-coupled receptor 39 		ENST00000329321 (GPR39-001) 132416574-132646559 protein_coding
ENST00000470071 (GPR39-002) 132604441-132646554 processed_transcript
ENST00000622084 (GPR39-201) 132417043-132418529 protein_coding
ENSG00000200718 (RN7SKP103)
RNA, 7SK small nuclear pseudogene 103 		ENST00000363848 (RN7SKP103-201) 132523617-132523936 misc_RNA
ENSG00000230065 (AC010974.3)
 ENST00000450509 (AC010974.3-001) 132660526-132666990 antisense
ENSG00000232349 (YBX1P7)
Y box binding protein 1 pseudogene 7 		ENST00000436766 (YBX1P7-001) 132488554-132489088 processed_pseudogene
CIL_0001J2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026343-ENSMUSG00000026344 CGP 10090 1:125676995-125913101
GeneTranscriptPositionBiotype
ENSMUSG00000026343 (Gpr39)
G protein-coupled receptor 39 		ENSMUST00000027581 (Gpr39-001) 125676995-125873862 protein_coding
ENSMUST00000159359 (Gpr39-002) 125840003-125873173 processed_transcript
ENSMUSG00000026344 (Lypd1)
Ly6/Plaur domain containing 1 		ENSMUST00000027582 (Lypd1-002) 125872318-125912928 protein_coding
ENSMUST00000159417 (Lypd1-001) 125867622-125912214 protein_coding
ENSMUST00000159529 (Lypd1-004) 125873101-125910908 protein_coding
ENSMUST00000161361 (Lypd1-005) 125873519-125913101 protein_coding
ENSMUST00000162899 (Lypd1-003) 125872284-125911387 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001J2_0001ENSG00000150551ENST00000345008ENST00000397463ENST00000449209ENSG00000183840ENST00000329321ENST00000470071ENST00000622084ENSG00000200718ENST00000363848ENSG00000230065ENST00000450509ENSG00000232349ENST00000436766CIL_0001J2_0002ENSMUSG00000026343ENSMUST00000027581ENSMUST00000159359ENSMUSG00000026344ENSMUST00000027582ENSMUST00000159417ENSMUST00000159529ENSMUST00000161361ENSMUST00000162899
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001J2_0001ENSG00000150551ENST00000345008ENST00000397463ENSG00000183840ENST00000329321ENST00000470071ENST00000622084ENSG00000200718ENST00000363848ENSG00000230065ENST00000450509ENSG00000232349ENST00000436766CIL_0001J2_0002ENSMUSG00000026343ENSMUST00000027581ENSMUSG00000026344ENSMUST00000027582ENSMUST00000159417ENSMUST00000159529ENSMUST00000162899
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000150551 ENST00000345008 0.019±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.103±0.00 N/A
ENST00000397463 N/A 0.466±0.00 0.926±0.00 3.770±0.85 0.359±0.14 2.659±2.23 0.014±0.00 2.097±1.63 1.248±0.83 1.038±0.73 N/A 7.202±6.07 0.260±0.00 5.772±1.56
ENST00000449209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000183840 ENST00000329321 N/A N/A N/A N/A 0.080±0.01 N/A N/A 0.770±0.20 0.453±0.31 0.443±0.00 N/A 1.941±0.58 0.063±0.01 0.994±0.09
ENST00000470071 N/A N/A 0.129±0.00 N/A N/A N/A 0.037±0.00 N/A N/A 0.235±0.00 0.465±0.00 N/A N/A N/A
ENST00000622084 0.026±0.00 N/A N/A N/A 0.631±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000200718 ENST00000363848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.445±0.00 N/A N/A
ENSG00000230065 ENST00000450509 N/A N/A N/A N/A N/A N/A N/A N/A 1.029±0.00 N/A N/A N/A N/A 0.699±0.00
ENSG00000232349 ENST00000436766 N/A N/A N/A N/A N/A 0.478±0.00 N/A N/A 0.090±0.00 0.230±0.00 N/A 0.050±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026343 ENSMUST00000027581 0.862±0.56 N/A 10.557±4.16 N/A 0.208±0.04 3.258±0.49 0.344±0.09 1.008±0.17 1.532±0.36 1.817±0.13 N/A 2.155±0.64 0.531±0.48 N/A
ENSMUST00000159359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026344 ENSMUST00000027582 1.170±0.00 N/A 9.764±1.84 14.473±5.04 0.153±0.01 4.485±0.80 0.899±0.05 1.441±0.37 1.508±0.46 2.077±0.21 0.036±0.01 2.921±0.95 1.109±0.93 4.501±2.07
ENSMUST00000159417 0.100±0.04 1.859±0.69 N/A 3.678±1.78 0.076±0.04 N/A 0.093±0.00 N/A N/A N/A N/A 0.537±0.30 0.018±0.00 N/A
ENSMUST00000159529 N/A N/A N/A 7.174±0.99 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162899 1.617±0.89 N/A 20.778±0.00 3.411±0.66 0.355±0.14 2.723±0.65 0.948±0.05 1.248±0.32 1.604±0.63 1.179±0.03 N/A 3.639±1.60 N/A N/A

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