C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ly6/Plaur domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162899 Lypd1-003 ENSMUSG00000026344 10090 - 1:125872284-125911387 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryENSMUST00000162899
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary
ENSMUST00000162899 1.617±0.89 20.778±0.00 3.411±0.66 0.355±0.14 2.723±0.65 0.948±0.05 1.248±0.32 1.604±0.63 1.179±0.03 3.639±1.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001J2 CIL_0001J2_0002 CGP 1:125676995-125913101
CIL_0001W8 CIL_0001W8_0002 CGP 1:125867622-126830799

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329321 GPR39-001 protein_coding Homo_sapiens 0 544
ENST00000345008 LYPD1-002 protein_coding Homo_sapiens 0 512
ENST00000397463 LYPD1-001 protein_coding Homo_sapiens 0 774
ENST00000449209 LYPD1-003 nonsense_mediated_decay Homo_sapiens 0 204
ENST00000470071 GPR39-002 processed_transcript Homo_sapiens 0 544

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