C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: abl-interactor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026782 Abi2 10090 + 1:60409619-60481158 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000052332 Abi2-001 60409619-60481158 protein_coding
  ENSMUST00000185788 Abi2-006 60437083-60477758 protein_coding
  ENSMUST00000186097 Abi2-009 60437212-60477083 protein_coding
  ENSMUST00000187400 Abi2-005 60437207-60476920 protein_coding
  ENSMUST00000187709 Abi2-007 60409803-60477158 protein_coding
  ENSMUST00000188594 Abi2-004 60409695-60477088 protein_coding
  ENSMUST00000188618 Abi2-002 60409695-60481158 protein_coding
  ENSMUST00000189082 Abi2-012 60409795-60447304 protein_coding
  ENSMUST00000189649 Abi2-010 60409808-60434492 retained_intron
  ENSMUST00000189980 Abi2-003 60409734-60479518 protein_coding
  ENSMUST00000190158 Abi2-008 60438942-60477304 protein_coding
  ENSMUST00000191493 Abi2-011 60409781-60444778 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052332ENSMUST00000186097ENSMUST00000187400ENSMUST00000187709ENSMUST00000188594ENSMUST00000188618ENSMUST00000189980
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052332 3.597±1.74 1.179±0.45 5.632±0.78 12.274±1.62 1.578±0.32 0.734±0.33 1.479±0.21 2.550±0.40 1.040±0.70 2.608±1.30 0.416±0.17 2.834±1.26 3.187±1.82 2.570±0.80
ENSMUST00000186097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.093±0.00 2.737±0.00 2.579±0.00
ENSMUST00000187400 N/A N/A N/A 27.994±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.108±0.00
ENSMUST00000187709 1.499±0.33 1.399±0.13 N/A N/A 0.643±0.08 0.627±0.20 N/A 1.472±0.16 0.135±0.00 1.064±0.19 N/A 2.888±0.76 N/A 4.784±0.09
ENSMUST00000188594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.808±0.00
ENSMUST00000188618 N/A N/A N/A 9.037±4.03 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189980 N/A N/A N/A 4.835±0.00 N/A 0.481±0.00 N/A N/A N/A N/A N/A 1.208±0.25 1.239±0.45 0.347±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000JP CIL_0000JP_0003 CGP 1:60343323-60481158
CIL_0000JQ CIL_0000JQ_0003 CGP 1:60409619-60567104

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005829 ISA cytosol
GO:0005856 IEA cytoskeleton
GO:0005913 IDA cell-cell adherens junction
GO:0007611 IMP learning or memory
GO:0008154 IEA actin polymerization or depolymerization
GO:0016358 IMP dendrite development
GO:0016477 IMP cell migration
GO:0018108 ISA peptidyl-tyrosine phosphorylation
GO:0030425 IDA dendrite
GO:0043010 IMP camera-type eye development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014875 abi2b abl-interactor 2b protein_coding Danio_rerio
ENSDARG00000058207 abi2a abl-interactor 2a protein_coding Danio_rerio
ENSG00000138443 ABI2 abl-interactor 2 protein_coding Homo_sapiens

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