C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0000JQ_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000058207-ENSDARG00000006301 | CGP | 7955 | 9:14009788-14148167  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000006301  (raph1)Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 |
ENSDART00000061156 (raph1-201)
|
14091195-14148167 | protein_coding | |
|
ENSDART00000132960 (raph1-002)
|
14115974-14129631 | processed_transcript | ||
|
ENSDART00000146597 (raph1-001)
|
14096379-14148167 | protein_coding | ||
|
ENSDARG00000058207 (abi2a) abl-interactor 2a |
ENSDART00000081015 (abi2a-201)
|
14009824-14076449 | protein_coding | |
|
ENSDART00000081040 (abi2a-001)
|
14009788-14074134 | protein_coding | ||
|
ENSDART00000131425 (abi2a-004)
|
14041489-14063185 | processed_transcript | ||
|
ENSDART00000138254 (abi2a-003)
|
14009824-14075608 | protein_coding | ||
|
ENSDART00000141314 (abi2a-002)
|
14009824-14075924 | protein_coding | ||
|
ENSDARG00000098022 (abi2a) |
ENSDART00000153809 (abi2a-001)
|
14073077-14086393 | antisense | |
|
ENSDART00000154003 (abi2a-002)
|
14073077-14086393 | antisense | ||
| CIL_0000JQ_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000138443-ENSG00000173166 | CGP | 9606 | 2:203328219-203535410 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000138443 (ABI2) abl-interactor 2 |
ENST00000261016 (ABI2-201)
|
203328239-203432172 | protein_coding | |
|
ENST00000261017 (ABI2-002)
|
203328280-203432173 | protein_coding | ||
|
ENST00000261018 (ABI2-202)
|
203328239-203432172 | protein_coding | ||
|
ENST00000295851 (ABI2-001)
|
203328219-203447723 | protein_coding | ||
|
ENST00000376135 (ABI2-015)
|
203328459-203383296 | processed_transcript | ||
|
ENST00000411547 (ABI2-016)
|
203380226-203402677 | processed_transcript | ||
|
ENST00000413635 (ABI2-011)
|
203328395-203376132 | nonsense_mediated_decay | ||
|
ENST00000416001 (ABI2-003)
|
203328391-203427569 | nonsense_mediated_decay | ||
|
ENST00000416396 (ABI2-021)
|
203394748-203427219 | processed_transcript | ||
|
ENST00000417864 (ABI2-006)
|
203328407-203427269 | protein_coding | ||
|
ENST00000422511 (ABI2-007)
|
203328484-203428596 | protein_coding | ||
|
ENST00000422719 (ABI2-017)
|
203380358-203416972 | processed_transcript | ||
|
ENST00000424558 (ABI2-005)
|
203328395-203427948 | protein_coding | ||
|
ENST00000425253 (ABI2-023)
|
203328394-203366957 | nonsense_mediated_decay | ||
|
ENST00000430418 (ABI2-004)
|
203328392-203427528 | protein_coding | ||
|
ENST00000430574 (ABI2-019)
|
203380275-203416983 | processed_transcript | ||
|
ENST00000431886 (ABI2-013)
|
203328399-203380277 | nonsense_mediated_decay | ||
|
ENST00000441061 (ABI2-008)
|
203328336-203427528 | nonsense_mediated_decay | ||
|
ENST00000444584 (ABI2-014)
|
203328405-203380273 | nonsense_mediated_decay | ||
|
ENST00000447762 (ABI2-024)
|
203328282-203380306 | nonsense_mediated_decay | ||
|
ENST00000451591 (ABI2-018)
|
203380308-203402734 | protein_coding | ||
|
ENST00000454023 (ABI2-020)
|
203391044-203427411 | protein_coding | ||
|
ENST00000464761 (ABI2-022)
|
203402706-203436883 | processed_transcript | ||
|
ENST00000494215 (ABI2-012)
|
203328458-203367419 | retained_intron | ||
| CIL_0000JQ_0003 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000026782-ENSMUSG00000026014 | CGP | 10090 | 1:60409619-60567104 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000026014 (Raph1) Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 |
ENSMUST00000027168 (Raph1-201)
|
60483236-60566765 | protein_coding | |
|
ENSMUST00000090293 (Raph1-003)
|
60490676-60566769 | protein_coding | ||
|
ENSMUST00000127573 (Raph1-007)
|
60513809-60522291 | retained_intron | ||
|
ENSMUST00000140485 (Raph1-001)
|
60482292-60566779 | protein_coding | ||
|
ENSMUST00000142258 (Raph1-004)
|
60525688-60567104 | protein_coding | ||
|
ENSMUST00000182085 (Raph1-005)
|
60483185-60499550 | protein_coding | ||
|
ENSMUST00000188511 (Raph1-002)
|
60493323-60496281 | retained_intron | ||
|
ENSMUST00000189383 (Raph1-006)
|
60501603-60503265 | retained_intron | ||
|
ENSMUSG00000026782 (Abi2) abl-interactor 2 |
ENSMUST00000052332 (Abi2-001)
|
60409619-60481158 | protein_coding | |
|
ENSMUST00000185788 (Abi2-006)
|
60437083-60477758 | protein_coding | ||
|
ENSMUST00000186097 (Abi2-009)
|
60437212-60477083 | protein_coding | ||
|
ENSMUST00000187400 (Abi2-005)
|
60437207-60476920 | protein_coding | ||
|
ENSMUST00000187709 (Abi2-007)
|
60409803-60477158 | protein_coding | ||
|
ENSMUST00000188594 (Abi2-004)
|
60409695-60477088 | protein_coding | ||
|
ENSMUST00000188618 (Abi2-002)
|
60409695-60481158 | protein_coding | ||
|
ENSMUST00000189082 (Abi2-012)
|
60409795-60447304 | protein_coding | ||
|
ENSMUST00000189649 (Abi2-010)
|
60409808-60434492 | retained_intron | ||
|
ENSMUST00000189980 (Abi2-003)
|
60409734-60479518 | protein_coding | ||
|
ENSMUST00000190158 (Abi2-008)
|
60438942-60477304 | protein_coding | ||
|
ENSMUST00000191493 (Abi2-011)
|
60409781-60444778 | retained_intron | ||
|
ENSMUSG00000081562 (Gm11575) predicted gene 11575 |
ENSMUST00000122243 (Gm11575-001)
|
60522839-60523066 | processed_pseudogene | |
|
ENSMUSG00000084400 (Gm11576) predicted gene 11576 |
ENSMUST00000117433 (Gm11576-001)
|
60537020-60537436 | processed_pseudogene | |
Expression Patterns
|
