C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: multiple PDZ domain protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028402 Mpdz 10090 - 4:81278500-81442815 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102830 Mpdz-001 81278505-81442807 protein_coding
  ENSMUST00000107258 Mpdz-010 81278505-81335872 protein_coding
  ENSMUST00000107262 Mpdz-201 81278500-81442805 protein_coding
  ENSMUST00000124805 Mpdz-005 81284577-81288071 retained_intron
  ENSMUST00000125288 Mpdz-009 81320346-81333041 protein_coding
  ENSMUST00000129732 Mpdz-004 81289888-81292829 retained_intron
  ENSMUST00000131197 Mpdz-013 81306800-81320523 protein_coding
  ENSMUST00000131418 Mpdz-006 81279235-81285538 retained_intron
  ENSMUST00000131547 Mpdz-014 81283374-81292612 protein_coding
  ENSMUST00000134572 Mpdz-012 81320368-81335830 protein_coding
  ENSMUST00000134726 Mpdz-011 81279338-81295584 protein_coding
  ENSMUST00000140425 Mpdz-003 81292559-81293174 retained_intron
  ENSMUST00000141995 Mpdz-008 81348630-81363115 protein_coding
  ENSMUST00000142273 Mpdz-002 81416540-81442815 retained_intron
  ENSMUST00000156441 Mpdz-007 81282990-81284699 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102830ENSMUST00000107258ENSMUST00000107262ENSMUST00000125288ENSMUST00000134726ENSMUST00000141995
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102830 2.007±0.00 1.827±0.64 1.803±0.00 2.941±0.11 1.055±0.11 0.449±0.11 1.253±0.15 0.778±0.21 0.361±0.16 1.676±0.20 2.662±0.52 1.091±0.46 0.832±0.38 0.439±0.03
ENSMUST00000107258 2.543±0.00 N/A 4.680±1.27 2.153±0.00 2.831±0.00 N/A N/A 0.573±0.00 1.452±0.66 N/A 2.332±0.00 3.352±0.91 1.700±0.37 0.350±0.11
ENSMUST00000107262 N/A N/A N/A N/A 0.559±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.993±0.00
ENSMUST00000134726 8.333±0.46 4.136±0.34 N/A N/A 3.552±1.27 1.043±0.08 3.631±0.28 2.176±0.47 1.441±0.34 3.596±0.68 N/A 2.651±0.72 N/A 0.588±0.00
ENSMUST00000141995 N/A N/A N/A N/A 4.023±0.93 1.664±0.00 N/A 2.364±0.16 N/A N/A N/A 3.451±0.36 N/A 0.767±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000145 CIL_000145_0002 CGP 4:80910646-81442815
CIL_0009AW CIL_0009AW_0002 VISTA 4:81168204-81769895
CIL_000746 CIL_000746_0002 CGP 4:81278500-82705750

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005923 IDA tight junction
GO:0007155 IDA cell adhesion
GO:0008022 IEA protein C-terminus binding
GO:0016324 IDA apical plasma membrane
GO:0016327 IEA apicolateral plasma membrane
GO:0031410 IDA cytoplasmic vesicle
GO:0042552 IEA myelination
GO:0043005 IEA neuron projection
GO:0043220 IDA Schmidt-Lanterman incisure
GO:0045211 IEA postsynaptic membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000107186 MPDZ multiple PDZ domain protein protein_coding Homo_sapiens

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