C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: multiple PDZ domain protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129732 Mpdz-004 ENSMUSG00000028402 10090 - 4:81289888-81292829 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000145 CIL_000145_0002 CGP 4:80910646-81442815
CIL_0009AW CIL_0009AW_0002 VISTA 4:81168204-81769895
CIL_000746 CIL_000746_0002 CGP 4:81278500-82705750

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319198 MPDZ-005 retained_intron Homo_sapiens 0 483
ENST00000319217 MPDZ-001 protein_coding Homo_sapiens 0 483
ENST00000381022 MPDZ-201 protein_coding Homo_sapiens 0 483
ENST00000437441 MPDZ-020 nonsense_mediated_decay Homo_sapiens 0 392
ENST00000438511 MPDZ-003 protein_coding Homo_sapiens 0 385
ENST00000447879 MPDZ-009 protein_coding Homo_sapiens 0 483
ENST00000536827 MPDZ-010 protein_coding Homo_sapiens 0 486
ENST00000538841 MPDZ-014 protein_coding Homo_sapiens 0 483
ENST00000539508 MPDZ-013 retained_intron Homo_sapiens 0 483
ENST00000541718 MPDZ-002 protein_coding Homo_sapiens 0 486
ENST00000542806 MPDZ-017 nonsense_mediated_decay Homo_sapiens 0 483
ENST00000545857 MPDZ-007 protein_coding Homo_sapiens 0 483
ENST00000546205 MPDZ-011 protein_coding Homo_sapiens 0 483

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