C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0009AW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1986 VISTA 9606 9:13014076-13615964
GeneTranscriptPositionBiotype
ENSG00000107186 (MPDZ)
multiple PDZ domain protein 		ENST00000319198 (MPDZ-005) 13106498-13175892 retained_intron
ENST00000319217 (MPDZ-001) 13105704-13279590 protein_coding
ENST00000381017 (MPDZ-006) 13105706-13120650 retained_intron
ENST00000381022 (MPDZ-201) 13105712-13279564 protein_coding
ENST00000433359 (MPDZ-015) 13138048-13165507 protein_coding
ENST00000437441 (MPDZ-020) 13115321-13123271 nonsense_mediated_decay
ENST00000438511 (MPDZ-003) 13106498-13136181 protein_coding
ENST00000447879 (MPDZ-009) 13106860-13250358 protein_coding
ENST00000494251 (MPDZ-008) 13205920-13219698 nonsense_mediated_decay
ENST00000535169 (MPDZ-019) 13125216-13140070 nonsense_mediated_decay
ENST00000536827 (MPDZ-010) 13106859-13250358 protein_coding
ENST00000538841 (MPDZ-014) 13106742-13165469 protein_coding
ENST00000539508 (MPDZ-013) 13106491-13190177 retained_intron
ENST00000540202 (MPDZ-018) 13136156-13140943 processed_transcript
ENST00000541718 (MPDZ-002) 13105710-13279564 protein_coding
ENST00000542239 (MPDZ-016) 13143485-13165458 protein_coding
ENST00000542806 (MPDZ-017) 13106931-13140045 nonsense_mediated_decay
ENST00000545857 (MPDZ-007) 13106572-13175824 protein_coding
ENST00000546205 (MPDZ-011) 13106943-13279407 protein_coding
ENSG00000223672 (RP11-272P10.3)
 ENST00000433817 (RP11-272P10.3-001) 13322806-13323450 processed_pseudogene
ENSG00000226197 (RP11-536O18.1)
 ENST00000428006 (RP11-536O18.1-001) 13446491-13487511 lincRNA
ENSG00000234586 (RP11-382H24.2)
 ENST00000414531 (RP11-382H24.2-001) 13021694-13022892 processed_pseudogene
ENSG00000234740 (RP11-272P10.2)
 ENST00000442428 (RP11-272P10.2-001) 13274510-13279187 sense_intronic
ENSG00000270547 (LINC01235)
long intergenic non-protein coding RNA 1235 		ENST00000604724 (LINC01235-001) 13406380-13431329 lincRNA
ENST00000605459 (LINC01235-002) 13416399-13433053 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0009AW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1986 VISTA 10090 4:81168204-81769895
GeneTranscriptPositionBiotype
ENSMUSG00000028402 (Mpdz)
multiple PDZ domain protein 		ENSMUST00000102830 (Mpdz-001) 81278505-81442807 protein_coding
ENSMUST00000107258 (Mpdz-010) 81278505-81335872 protein_coding
ENSMUST00000107262 (Mpdz-201) 81278500-81442805 protein_coding
ENSMUST00000124805 (Mpdz-005) 81284577-81288071 retained_intron
ENSMUST00000125288 (Mpdz-009) 81320346-81333041 protein_coding
ENSMUST00000129732 (Mpdz-004) 81289888-81292829 retained_intron
ENSMUST00000131197 (Mpdz-013) 81306800-81320523 protein_coding
ENSMUST00000131418 (Mpdz-006) 81279235-81285538 retained_intron
ENSMUST00000131547 (Mpdz-014) 81283374-81292612 protein_coding
ENSMUST00000134572 (Mpdz-012) 81320368-81335830 protein_coding
ENSMUST00000134726 (Mpdz-011) 81279338-81295584 protein_coding
ENSMUST00000140425 (Mpdz-003) 81292559-81293174 retained_intron
ENSMUST00000141995 (Mpdz-008) 81348630-81363115 protein_coding
ENSMUST00000142273 (Mpdz-002) 81416540-81442815 retained_intron
ENSMUST00000156441 (Mpdz-007) 81282990-81284699 retained_intron
ENSMUSG00000081391 (Gm11765)
predicted gene 11765 		ENSMUST00000121173 (Gm11765-001) 81455943-81461732 processed_pseudogene
ENSMUSG00000087540 (Gm11412)
predicted gene 11412 		ENSMUST00000144875 (Gm11412-001) 81743146-81746701 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0009AW_0001ENSG00000107186ENST00000319198ENST00000319217ENST00000381017ENST00000381022ENST00000433359ENST00000437441ENST00000438511ENST00000447879ENST00000494251ENST00000535169ENST00000536827ENST00000538841ENST00000539508ENST00000540202ENST00000541718ENST00000542239ENST00000542806ENST00000545857ENST00000546205ENSG00000223672ENST00000433817ENSG00000226197ENST00000428006ENSG00000234586ENST00000414531ENSG00000234740ENST00000442428ENSG00000270547ENST00000604724ENST00000605459CIL_0009AW_0002ENSMUSG00000028402ENSMUST00000102830ENSMUST00000107258ENSMUST00000107262ENSMUST00000124805ENSMUST00000125288ENSMUST00000129732ENSMUST00000131197ENSMUST00000131418ENSMUST00000131547ENSMUST00000134572ENSMUST00000134726ENSMUST00000140425ENSMUST00000141995ENSMUST00000142273ENSMUST00000156441ENSMUSG00000081391ENSMUST00000121173ENSMUSG00000087540ENSMUST00000144875
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0009AW_0001ENSG00000107186ENST00000319198ENST00000319217ENST00000381022ENST00000433359ENST00000438511ENST00000447879ENST00000536827ENST00000538841ENST00000539508ENST00000541718ENST00000545857ENSG00000223672ENST00000433817ENSG00000226197ENST00000428006ENSG00000234586ENST00000414531ENSG00000234740ENST00000442428ENSG00000270547ENST00000604724ENST00000605459CIL_0009AW_0002ENSMUSG00000028402ENSMUST00000102830ENSMUST00000107258ENSMUST00000107262ENSMUST00000125288ENSMUST00000134726ENSMUST00000141995ENSMUSG00000081391ENSMUST00000121173ENSMUSG00000087540ENSMUST00000144875
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107186 ENST00000319198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.544±0.00 N/A N/A N/A
ENST00000319217 N/A N/A N/A 1.548±0.00 N/A N/A 2.710±1.14 N/A 2.134±0.00 N/A 1.112±0.00 N/A 0.681±0.00 N/A
ENST00000381017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000381022 6.172±0.00 2.977±0.00 N/A 3.474±1.96 2.328±0.79 6.778±0.00 4.459±0.00 2.724±0.00 0.814±0.00 2.235±0.20 N/A 2.884±1.92 2.197±0.16 5.378±0.00
ENST00000433359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.958±0.00 N/A
ENST00000437441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.383±0.00 N/A N/A
ENST00000447879 N/A N/A 2.243±0.00 1.860±0.00 4.312±0.00 N/A 1.584±0.00 N/A 4.326±0.00 2.039±0.89 1.336±0.14 1.351±0.00 N/A 1.632±0.00
ENST00000494251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536827 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.086±0.00 N/A 0.167±0.00 1.887±0.00 N/A
ENST00000538841 N/A N/A N/A 4.254±0.00 N/A N/A N/A N/A N/A N/A N/A 0.614±0.00 N/A 3.708±0.00
ENST00000539508 N/A N/A N/A N/A N/A 0.601±0.00 N/A N/A 2.021±0.00 1.250±0.00 N/A N/A N/A N/A
ENST00000540202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541718 N/A N/A N/A N/A N/A N/A 2.664±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000542239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545857 4.366±0.00 N/A N/A N/A N/A N/A 2.602±0.00 12.364±0.00 N/A N/A N/A 9.496±0.00 2.140±0.33 N/A
ENST00000546205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000223672 ENST00000433817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.066±0.00
ENSG00000226197 ENST00000428006 0.798±0.00 6.617±0.00 N/A N/A 1.918±1.70 1.210±0.00 1.094±0.00 0.094±0.00 N/A 0.355±0.00 0.337±0.00 0.250±0.17 2.197±0.65 0.857±0.00
ENSG00000234586 ENST00000414531 N/A N/A N/A 0.015±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.014±0.00
ENSG00000234740 ENST00000442428 N/A 0.207±0.00 N/A 0.395±0.00 0.680±0.65 N/A 0.028±0.00 N/A N/A 0.129±0.00 N/A 0.249±0.00 0.089±0.02 0.488±0.00
ENSG00000270547 ENST00000604724 0.226±0.00 0.717±0.00 N/A 0.232±0.02 N/A N/A 0.035±0.03 0.227±0.00 0.026±0.00 0.044±0.00 0.008±0.00 0.102±0.07 0.021±0.01 0.126±0.00
ENST00000605459 N/A N/A N/A N/A 1.767±0.00 N/A N/A N/A N/A N/A 3.228±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028402 ENSMUST00000102830 2.007±0.00 1.827±0.64 1.803±0.00 2.941±0.11 1.055±0.11 0.449±0.11 1.253±0.15 0.778±0.21 0.361±0.16 1.676±0.20 2.662±0.52 1.091±0.46 0.832±0.38 0.439±0.03
ENSMUST00000107258 2.543±0.00 N/A 4.680±1.27 2.153±0.00 2.831±0.00 N/A N/A 0.573±0.00 1.452±0.66 N/A 2.332±0.00 3.352±0.91 1.700±0.37 0.350±0.11
ENSMUST00000107262 N/A N/A N/A N/A 0.559±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.993±0.00
ENSMUST00000129732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134726 8.333±0.46 4.136±0.34 N/A N/A 3.552±1.27 1.043±0.08 3.631±0.28 2.176±0.47 1.441±0.34 3.596±0.68 N/A 2.651±0.72 N/A 0.588±0.00
ENSMUST00000140425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141995 N/A N/A N/A N/A 4.023±0.93 1.664±0.00 N/A 2.364±0.16 N/A N/A N/A 3.451±0.36 N/A 0.767±0.00
ENSMUST00000142273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081391 ENSMUST00000121173 N/A 0.084±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.136±0.10 N/A N/A
ENSMUSG00000087540 ENSMUST00000144875 0.018±0.01 N/A 0.007±0.00 0.019±0.02 0.039±0.02 N/A N/A 0.014±0.00 0.008±0.00 0.023±0.00 N/A 0.026±0.03 0.002±0.00 N/A

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