C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000746_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000107186-ENSG00000147862 CGP 9606 9:13105704-14398983
GeneTranscriptPositionBiotype
ENSG00000107186 (MPDZ)
multiple PDZ domain protein 		ENST00000319198 (MPDZ-005) 13106498-13175892 retained_intron
ENST00000319217 (MPDZ-001) 13105704-13279590 protein_coding
ENST00000381017 (MPDZ-006) 13105706-13120650 retained_intron
ENST00000381022 (MPDZ-201) 13105712-13279564 protein_coding
ENST00000433359 (MPDZ-015) 13138048-13165507 protein_coding
ENST00000437441 (MPDZ-020) 13115321-13123271 nonsense_mediated_decay
ENST00000438511 (MPDZ-003) 13106498-13136181 protein_coding
ENST00000447879 (MPDZ-009) 13106860-13250358 protein_coding
ENST00000494251 (MPDZ-008) 13205920-13219698 nonsense_mediated_decay
ENST00000535169 (MPDZ-019) 13125216-13140070 nonsense_mediated_decay
ENST00000536827 (MPDZ-010) 13106859-13250358 protein_coding
ENST00000538841 (MPDZ-014) 13106742-13165469 protein_coding
ENST00000539508 (MPDZ-013) 13106491-13190177 retained_intron
ENST00000540202 (MPDZ-018) 13136156-13140943 processed_transcript
ENST00000541718 (MPDZ-002) 13105710-13279564 protein_coding
ENST00000542239 (MPDZ-016) 13143485-13165458 protein_coding
ENST00000542806 (MPDZ-017) 13106931-13140045 nonsense_mediated_decay
ENST00000545857 (MPDZ-007) 13106572-13175824 protein_coding
ENST00000546205 (MPDZ-011) 13106943-13279407 protein_coding
ENSG00000205636 (LINC00583)
long intergenic non-protein coding RNA 583 		ENST00000381010 (LINC00583-001) 13927971-13945610 lincRNA
ENSG00000213954 (ATP5HP3)
ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, pseudogene 3 		ENST00000396994 (ATP5HP3-009) 14068932-14069417 processed_pseudogene
ENSG00000223568 (RPL3P11)
ribosomal protein L3 pseudogene 11 		ENST00000434028 (RPL3P11-001) 14040716-14041861 processed_pseudogene
ENSG00000223672 (RP11-272P10.3)
 ENST00000433817 (RP11-272P10.3-001) 13322806-13323450 processed_pseudogene
ENSG00000225472 (RP11-120J1.1)
 ENST00000416996 (RP11-120J1.1-001) 14317085-14357854 antisense
ENST00000440947 (RP11-120J1.1-002) 14347320-14357908 antisense
ENSG00000226197 (RP11-536O18.1)
 ENST00000428006 (RP11-536O18.1-001) 13446491-13487511 lincRNA
ENSG00000229268 (PES1P2)
pescadillo ribosomal biogenesis factor 1 pseudogene 2 		ENST00000449745 (PES1P2-001) 13986175-13987909 processed_pseudogene
ENSG00000234740 (RP11-272P10.2)
 ENST00000442428 (RP11-272P10.2-001) 13274510-13279187 sense_intronic
ENSG00000234982 (RP11-280O24.3)
 ENST00000435137 (RP11-280O24.3-001) 14204248-14205039 processed_pseudogene
ENSG00000235533 (RP11-284P20.3)
 ENST00000442260 (RP11-284P20.3-001) 14025971-14030115 lincRNA
ENSG00000270547 (LINC01235)
long intergenic non-protein coding RNA 1235 		ENST00000604724 (LINC01235-001) 13406380-13431329 lincRNA
ENST00000605459 (LINC01235-002) 13416399-13433053 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_000746_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028402-ENSMUSG00000008575 CGP 10090 4:81278500-82705750
GeneTranscriptPositionBiotype
ENSMUSG00000008575 (Nfib)
nuclear factor I/B 		ENSMUST00000050872 (Nfib-201) 82290173-82505308 protein_coding
ENSMUST00000064770 (Nfib-202) 82290176-82505308 protein_coding
ENSMUST00000107245 (Nfib-001) 82290173-82505770 protein_coding
ENSMUST00000107246 (Nfib-007) 82296081-82505770 protein_coding
ENSMUST00000107247 (Nfib-003) 82296048-82505707 protein_coding
ENSMUST00000107248 (Nfib-002) 82296048-82505707 protein_coding
ENSMUST00000122918 (Nfib-006) 82326825-82505310 retained_intron
ENSMUST00000135024 (Nfib-008) 82495984-82505779 retained_intron
ENSMUST00000140874 (Nfib-005) 82328594-82505310 retained_intron
ENSMUST00000148982 (Nfib-011) 82353052-82505764 retained_intron
ENSMUST00000152588 (Nfib-009) 82498544-82499316 processed_transcript
ENSMUST00000155821 (Nfib-010) 82498321-82705750 protein_coding
ENSMUSG00000028402 (Mpdz)
multiple PDZ domain protein 		ENSMUST00000102830 (Mpdz-001) 81278505-81442807 protein_coding
ENSMUST00000107258 (Mpdz-010) 81278505-81335872 protein_coding
ENSMUST00000107262 (Mpdz-201) 81278500-81442805 protein_coding
ENSMUST00000124805 (Mpdz-005) 81284577-81288071 retained_intron
ENSMUST00000125288 (Mpdz-009) 81320346-81333041 protein_coding
ENSMUST00000129732 (Mpdz-004) 81289888-81292829 retained_intron
ENSMUST00000131197 (Mpdz-013) 81306800-81320523 protein_coding
ENSMUST00000131418 (Mpdz-006) 81279235-81285538 retained_intron
ENSMUST00000131547 (Mpdz-014) 81283374-81292612 protein_coding
ENSMUST00000134572 (Mpdz-012) 81320368-81335830 protein_coding
ENSMUST00000134726 (Mpdz-011) 81279338-81295584 protein_coding
ENSMUST00000140425 (Mpdz-003) 81292559-81293174 retained_intron
ENSMUST00000141995 (Mpdz-008) 81348630-81363115 protein_coding
ENSMUST00000142273 (Mpdz-002) 81416540-81442815 retained_intron
ENSMUST00000156441 (Mpdz-007) 81282990-81284699 retained_intron
ENSMUSG00000081391 (Gm11765)
predicted gene 11765 		ENSMUST00000121173 (Gm11765-001) 81455943-81461732 processed_pseudogene
ENSMUSG00000084851 (Gm11267)
predicted gene 11267 		ENSMUST00000137477 (Gm11267-001) 82585048-82587319 sense_intronic
ENSMUSG00000085022 (Gm5860)
predicted gene 5860 		ENSMUST00000137810 (Gm5860-001) 82065431-82102808 lincRNA
ENSMUST00000151038 (Gm5860-003) 82065873-82067775 lincRNA
ENSMUST00000161588 (Gm5860-002) 82065957-82102673 lincRNA
ENSMUSG00000086293 (Gm11269)
predicted gene 11269 		ENSMUST00000157011 (Gm11269-001) 82692805-82693711 antisense
ENSMUSG00000087110 (Gm11264)
predicted gene 11264 		ENSMUST00000143755 (Gm11264-001) 82033312-82065890 lincRNA
ENSMUSG00000087413 (Gm11266)
predicted gene 11266 		ENSMUST00000139835 (Gm11266-001) 82508016-82547292 antisense
ENSMUSG00000087540 (Gm11412)
predicted gene 11412 		ENSMUST00000144875 (Gm11412-001) 81743146-81746701 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000746_0001ENSG00000107186ENST00000319198ENST00000319217ENST00000381017ENST00000381022ENST00000433359ENST00000437441ENST00000438511ENST00000447879ENST00000494251ENST00000535169ENST00000536827ENST00000538841ENST00000539508ENST00000540202ENST00000541718ENST00000542239ENST00000542806ENST00000545857ENST00000546205ENSG00000205636ENST00000381010ENSG00000213954ENST00000396994ENSG00000223568ENST00000434028ENSG00000223672ENST00000433817ENSG00000225472ENST00000416996ENST00000440947ENSG00000226197ENST00000428006ENSG00000229268ENST00000449745ENSG00000234740ENST00000442428ENSG00000234982ENST00000435137ENSG00000235533ENST00000442260ENSG00000270547ENST00000604724ENST00000605459CIL_000746_0002ENSMUSG00000008575ENSMUST00000050872ENSMUST00000064770ENSMUST00000107245ENSMUST00000107246ENSMUST00000107247ENSMUST00000107248ENSMUST00000122918ENSMUST00000135024ENSMUST00000140874ENSMUST00000148982ENSMUST00000152588ENSMUST00000155821ENSMUSG00000028402ENSMUST00000102830ENSMUST00000107258ENSMUST00000107262ENSMUST00000124805ENSMUST00000125288ENSMUST00000129732ENSMUST00000131197ENSMUST00000131418ENSMUST00000131547ENSMUST00000134572ENSMUST00000134726ENSMUST00000140425ENSMUST00000141995ENSMUST00000142273ENSMUST00000156441ENSMUSG00000081391ENSMUST00000121173ENSMUSG00000084851ENSMUST00000137477ENSMUSG00000085022ENSMUST00000137810ENSMUST00000151038ENSMUST00000161588ENSMUSG00000086293ENSMUST00000157011ENSMUSG00000087110ENSMUST00000143755ENSMUSG00000087413ENSMUST00000139835ENSMUSG00000087540ENSMUST00000144875
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000746_0001ENSG00000107186ENST00000319198ENST00000319217ENST00000381022ENST00000433359ENST00000438511ENST00000447879ENST00000536827ENST00000538841ENST00000539508ENST00000541718ENST00000545857ENSG00000205636ENST00000381010ENSG00000213954ENST00000396994ENSG00000223568ENST00000434028ENSG00000223672ENST00000433817ENSG00000225472ENST00000416996ENST00000440947ENSG00000226197ENST00000428006ENSG00000229268ENST00000449745ENSG00000234740ENST00000442428ENSG00000234982ENST00000435137ENSG00000235533ENST00000442260ENSG00000270547ENST00000604724ENST00000605459CIL_000746_0002ENSMUSG00000008575ENSMUST00000050872ENSMUST00000064770ENSMUST00000107245ENSMUST00000107246ENSMUST00000107247ENSMUST00000107248ENSMUSG00000028402ENSMUST00000102830ENSMUST00000107258ENSMUST00000107262ENSMUST00000125288ENSMUST00000134726ENSMUST00000141995ENSMUSG00000081391ENSMUST00000121173ENSMUSG00000084851ENSMUST00000137477ENSMUSG00000085022ENSMUST00000137810ENSMUST00000151038ENSMUST00000161588ENSMUSG00000086293ENSMUST00000157011ENSMUSG00000087110ENSMUST00000143755ENSMUSG00000087413ENSMUST00000139835ENSMUSG00000087540ENSMUST00000144875
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107186 ENST00000319198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.544±0.00 N/A N/A N/A
ENST00000319217 N/A N/A N/A 1.548±0.00 N/A N/A 2.710±1.14 N/A 2.134±0.00 N/A 1.112±0.00 N/A 0.681±0.00 N/A
ENST00000381017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000381022 6.172±0.00 2.977±0.00 N/A 3.474±1.96 2.328±0.79 6.778±0.00 4.459±0.00 2.724±0.00 0.814±0.00 2.235±0.20 N/A 2.884±1.92 2.197±0.16 5.378±0.00
ENST00000433359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.958±0.00 N/A
ENST00000437441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.383±0.00 N/A N/A
ENST00000447879 N/A N/A 2.243±0.00 1.860±0.00 4.312±0.00 N/A 1.584±0.00 N/A 4.326±0.00 2.039±0.89 1.336±0.14 1.351±0.00 N/A 1.632±0.00
ENST00000494251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536827 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.086±0.00 N/A 0.167±0.00 1.887±0.00 N/A
ENST00000538841 N/A N/A N/A 4.254±0.00 N/A N/A N/A N/A N/A N/A N/A 0.614±0.00 N/A 3.708±0.00
ENST00000539508 N/A N/A N/A N/A N/A 0.601±0.00 N/A N/A 2.021±0.00 1.250±0.00 N/A N/A N/A N/A
ENST00000540202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541718 N/A N/A N/A N/A N/A N/A 2.664±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000542239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545857 4.366±0.00 N/A N/A N/A N/A N/A 2.602±0.00 12.364±0.00 N/A N/A N/A 9.496±0.00 2.140±0.33 N/A
ENST00000546205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000205636 ENST00000381010 N/A 0.051±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213954 ENST00000396994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.024±0.00
ENSG00000223568 ENST00000434028 N/A 0.028±0.00 N/A 0.014±0.00 N/A 0.039±0.00 N/A N/A 0.012±0.00 N/A 0.012±0.00 N/A N/A 0.025±0.00
ENSG00000223672 ENST00000433817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.066±0.00
ENSG00000225472 ENST00000416996 N/A N/A 0.054±0.00 0.208±0.00 0.129±0.05 0.208±0.00 0.494±0.17 N/A 0.114±0.00 0.124±0.00 0.372±0.33 0.201±0.01 0.134±0.02 0.095±0.01
ENST00000440947 N/A 0.402±0.00 N/A 1.195±0.82 0.100±0.00 N/A 0.426±0.00 N/A 0.055±0.00 0.073±0.00 N/A 0.095±0.03 N/A 0.288±0.00
ENSG00000226197 ENST00000428006 0.798±0.00 6.617±0.00 N/A N/A 1.918±1.70 1.210±0.00 1.094±0.00 0.094±0.00 N/A 0.355±0.00 0.337±0.00 0.250±0.17 2.197±0.65 0.857±0.00
ENSG00000229268 ENST00000449745 0.010±0.00 N/A 0.095±0.00 0.033±0.00 0.011±0.00 0.031±0.00 0.049±0.00 0.022±0.00 N/A N/A N/A N/A 0.027±0.00 0.065±0.03
ENSG00000234740 ENST00000442428 N/A 0.207±0.00 N/A 0.395±0.00 0.680±0.65 N/A 0.028±0.00 N/A N/A 0.129±0.00 N/A 0.249±0.00 0.089±0.02 0.488±0.00
ENSG00000234982 ENST00000435137 0.088±0.00 0.468±0.00 0.163±0.00 0.129±0.00 0.167±0.02 0.181±0.00 0.123±0.10 0.097±0.00 0.105±0.00 0.339±0.06 0.184±0.00 0.178±0.14 N/A 0.208±0.00
ENSG00000235533 ENST00000442260 N/A N/A N/A N/A N/A N/A 0.138±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000270547 ENST00000604724 0.226±0.00 0.717±0.00 N/A 0.232±0.02 N/A N/A 0.035±0.03 0.227±0.00 0.026±0.00 0.044±0.00 0.008±0.00 0.102±0.07 0.021±0.01 0.126±0.00
ENST00000605459 N/A N/A N/A N/A 1.767±0.00 N/A N/A N/A N/A N/A 3.228±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000008575 ENSMUST00000050872 4.890±1.65 3.903±1.13 1.975±0.45 7.048±1.28 3.093±0.42 2.597±0.61 N/A 2.273±0.44 2.282±2.04 8.668±1.01 N/A 2.321±0.67 0.367±0.16 0.207±0.07
ENSMUST00000064770 10.002±0.90 7.984±0.52 11.134±0.93 14.473±7.32 8.227±1.08 2.632±0.51 14.837±1.78 4.922±0.77 2.497±1.34 17.975±1.07 6.318±1.68 4.755±1.35 0.948±0.52 0.347±0.08
ENSMUST00000107245 2.949±0.01 1.607±0.03 3.258±0.97 N/A 1.604±0.29 0.920±0.27 N/A 0.778±0.00 0.297±0.01 3.826±0.17 1.345±0.00 1.116±0.26 0.426±0.20 0.126±0.01
ENSMUST00000107246 N/A N/A N/A 10.268±0.00 N/A N/A N/A N/A N/A N/A N/A 10.689±0.00 1.163±0.56 0.913±0.00
ENSMUST00000107247 N/A 2.390±0.71 N/A N/A 3.519±0.76 1.423±0.41 N/A 2.195±0.42 2.177±0.23 N/A N/A 2.219±0.56 N/A 0.131±0.00
ENSMUST00000107248 4.863±0.00 1.634±0.12 N/A N/A 3.194±1.26 1.247±0.00 N/A N/A 3.614±0.00 N/A N/A 1.422±0.42 N/A 0.202±0.00
ENSMUST00000122918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000028402 ENSMUST00000102830 2.007±0.00 1.827±0.64 1.803±0.00 2.941±0.11 1.055±0.11 0.449±0.11 1.253±0.15 0.778±0.21 0.361±0.16 1.676±0.20 2.662±0.52 1.091±0.46 0.832±0.38 0.439±0.03
ENSMUST00000107258 2.543±0.00 N/A 4.680±1.27 2.153±0.00 2.831±0.00 N/A N/A 0.573±0.00 1.452±0.66 N/A 2.332±0.00 3.352±0.91 1.700±0.37 0.350±0.11
ENSMUST00000107262 N/A N/A N/A N/A 0.559±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.993±0.00
ENSMUST00000129732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134726 8.333±0.46 4.136±0.34 N/A N/A 3.552±1.27 1.043±0.08 3.631±0.28 2.176±0.47 1.441±0.34 3.596±0.68 N/A 2.651±0.72 N/A 0.588±0.00
ENSMUST00000140425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141995 N/A N/A N/A N/A 4.023±0.93 1.664±0.00 N/A 2.364±0.16 N/A N/A N/A 3.451±0.36 N/A 0.767±0.00
ENSMUST00000142273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081391 ENSMUST00000121173 N/A 0.084±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.136±0.10 N/A N/A
ENSMUSG00000084851 ENSMUST00000137477 N/A N/A N/A 0.071±0.00 N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A N/A 0.074±0.03
ENSMUSG00000085022 ENSMUST00000137810 0.043±0.00 0.163±0.06 0.024±0.01 0.124±0.10 0.230±0.11 N/A 0.594±0.05 0.044±0.00 0.040±0.02 0.056±0.00 2.957±0.72 0.128±0.09 0.095±0.12 0.591±0.29
ENSMUST00000151038 0.184±0.02 0.123±0.00 0.009±0.00 0.025±0.01 0.077±0.04 N/A 0.497±0.04 0.094±0.04 0.021±0.01 0.033±0.00 0.975±0.16 0.146±0.12 0.013±0.01 0.005±0.00
ENSMUST00000161588 N/A N/A N/A N/A N/A N/A N/A 0.257±0.04 N/A 0.373±0.00 N/A N/A N/A N/A
ENSMUSG00000086293 ENSMUST00000157011 N/A N/A N/A 0.052±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.947±2.71
ENSMUSG00000087110 ENSMUST00000143755 N/A N/A 0.010±0.01 N/A N/A N/A 0.089±0.00 N/A 0.003±0.00 N/A N/A N/A N/A 0.053±0.04
ENSMUSG00000087413 ENSMUST00000139835 1.072±0.60 1.855±0.38 1.891±0.62 4.815±3.78 0.924±0.21 0.275±0.13 1.244±0.12 0.154±0.04 0.601±0.19 0.827±0.45 3.155±0.51 0.717±0.47 0.061±0.05 0.069±0.04
ENSMUSG00000087540 ENSMUST00000144875 0.018±0.01 N/A 0.007±0.00 0.019±0.02 0.039±0.02 N/A N/A 0.014±0.00 0.008±0.00 0.023±0.00 N/A 0.026±0.03 0.002±0.00 N/A

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