C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TM2 domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028563 Tm2d1 10090 - 4:98355370-98383306 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030292 Tm2d1-002 98355370-98383246 protein_coding
  ENSMUST00000102793 Tm2d1-001 98355370-98383306 protein_coding
  ENSMUST00000107051 Tm2d1-003 98355370-98383060 protein_coding
  ENSMUST00000125034 Tm2d1-005 98355370-98375028 nonsense_mediated_decay
  ENSMUST00000143116 Tm2d1-004 98355605-98383232 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030292ENSMUST00000102793ENSMUST00000107051ENSMUST00000143116
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.877±0.00
ENSMUST00000102793 13.566±1.49 50.511±38.72 20.318±3.91 17.488±11.48 8.560±2.30 7.903±6.71 14.519±0.19 22.379±5.67 11.860±3.01 17.700±6.72 18.203±1.19 16.810±13.57 12.998±9.82 5.661±2.75
ENSMUST00000107051 N/A N/A N/A 4.494±0.00 N/A N/A N/A N/A N/A N/A N/A 7.624±2.73 3.700±1.00 N/A
ENSMUST00000143116 17.344±0.00 N/A N/A 11.932±0.00 4.716±1.04 N/A N/A 10.160±0.60 5.373±2.88 6.912±0.00 N/A 13.815±3.16 13.970±4.24 2.008±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001NA CIL_0001NA_0002 CGP 4:97772734-98383306
CIL_0008LM CIL_0008LM_0002 VISTA 4:97807609-98410094
CIL_00085K CIL_00085K_0002 VISTA 4:97921540-98524627
CIL_00094S CIL_00094S_0002 VISTA 4:97942382-98545050
CIL_0002G1 CIL_0002G1_0002 CGP 4:98355370-98719603

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001540 IDA beta-amyloid binding
GO:0004930 IDA G-protein coupled receptor activity
GO:0005887 IDA integral component of plasma membrane
GO:0007186 IDA G-protein coupled receptor signaling pathway
GO:0097190 IDA apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057042 tm2d1 TM2 domain containing 1 protein_coding Danio_rerio
ENSG00000162604 TM2D1 TM2 domain containing 1 protein_coding Homo_sapiens

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